Gene : Medtr6g007070 M. truncatula Mt4.0v1
Defline:  (1 of 1) 1.4.3.16 - L-aspartate oxidase / LASPO Description:  L-aspartate oxidase
Genomic Order:  195 Name:  ? Medtr6g007070
Secondary Identifier:  ? PAC:31103834
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PYRIDNUCSYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g007070 0.5kb upstream 0.5kb upstream 5932 true chr6: 1398609-1404540 Medicago truncatula
Medtr6g007070 0.5kb upstream 0.5kb upstream 500 false chr6: 1398609-1399108 Medicago truncatula
Medtr6g007070 0.5kb downstream 0.5kb downstream 5932 true chr6: 1399109-1405040 Medicago truncatula
Medtr6g007070 0.5kb downstream 0.5kb downstream 500 false chr6: 1404541-1405040 Medicago truncatula
Medtr6g007070 1.0kb upstream 1.0kb upstream 6432 true chr6: 1398109-1404540 Medicago truncatula
Medtr6g007070 1.0kb upstream 1.0kb upstream 1000 false chr6: 1398109-1399108 Medicago truncatula
Medtr6g007070 1.0kb downstream 1.0kb downstream 6432 true chr6: 1399109-1405540 Medicago truncatula
Medtr6g007070 1.0kb downstream 1.0kb downstream 1000 false chr6: 1404541-1405540 Medicago truncatula
Medtr6g007070 2.0kb upstream 2.0kb upstream 7432 true chr6: 1397109-1404540 Medicago truncatula
Medtr6g007070 2.0kb upstream 2.0kb upstream 2000 false chr6: 1397109-1399108 Medicago truncatula
Medtr6g007070 2.0kb downstream 2.0kb downstream 7432 true chr6: 1399109-1406540 Medicago truncatula
Medtr6g007070 2.0kb downstream 2.0kb downstream 2000 false chr6: 1404541-1406540 Medicago truncatula
Medtr6g007070 5.0kb upstream 5.0kb upstream 10432 true chr6: 1394109-1404540 Medicago truncatula
Medtr6g007070 5.0kb upstream 5.0kb upstream 5000 false chr6: 1394109-1399108 Medicago truncatula
Medtr6g007070 5.0kb downstream 5.0kb downstream 10432 true chr6: 1399109-1409540 Medicago truncatula
Medtr6g007070 5.0kb downstream 5.0kb downstream 5000 false chr6: 1404541-1409540 Medicago truncatula
Medtr6g007070 10.0kb upstream 10.0kb upstream 15432 true chr6: 1389109-1404540 Medicago truncatula
Medtr6g007070 10.0kb upstream 10.0kb upstream 10000 false chr6: 1389109-1399108 Medicago truncatula
Medtr6g007070 10.0kb downstream 10.0kb downstream 15432 true chr6: 1399109-1414540 Medicago truncatula
Medtr6g007070 10.0kb downstream 10.0kb downstream 10000 false chr6: 1404541-1414540 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303929 5265 Fabidae View MSA
124067870 5270 Rosid View MSA
123737542 5271 Pentapetalae View MSA
122792941 5272 Eudicot View MSA
122044025 5273 Angiosperm View MSA
121345783 5274 Embryophyte View MSA
123424759 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.01     Low Low
cufflinks 0.327        
cufflinks 0.181        
cufflinks 0.002     Low Low
cufflinks 0.292        
cufflinks 0.08     Low  
cufflinks 0.061     Low  
cufflinks 0.16        
cufflinks 0.246        

0 Strain