Gene : Medtr6g004930 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF07223 - Protein of unknown function (DUF1421) (DUF1421) Description:  DNA-binding protein, putative
Genomic Order:  75 Name:  ? Medtr6g004930
Secondary Identifier:  ? PAC:31103569
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g004930 0.5kb upstream 0.5kb upstream 6231 true chr6: 505865-512095 Medicago truncatula
Medtr6g004930 0.5kb upstream 0.5kb upstream 500 false chr6: 505865-506364 Medicago truncatula
Medtr6g004930 0.5kb downstream 0.5kb downstream 6231 true chr6: 506365-512595 Medicago truncatula
Medtr6g004930 0.5kb downstream 0.5kb downstream 500 false chr6: 512096-512595 Medicago truncatula
Medtr6g004930 1.0kb upstream 1.0kb upstream 6731 true chr6: 505365-512095 Medicago truncatula
Medtr6g004930 1.0kb upstream 1.0kb upstream 1000 false chr6: 505365-506364 Medicago truncatula
Medtr6g004930 1.0kb downstream 1.0kb downstream 6731 true chr6: 506365-513095 Medicago truncatula
Medtr6g004930 1.0kb downstream 1.0kb downstream 1000 false chr6: 512096-513095 Medicago truncatula
Medtr6g004930 2.0kb upstream 2.0kb upstream 7731 true chr6: 504365-512095 Medicago truncatula
Medtr6g004930 2.0kb upstream 2.0kb upstream 2000 false chr6: 504365-506364 Medicago truncatula
Medtr6g004930 2.0kb downstream 2.0kb downstream 7731 true chr6: 506365-514095 Medicago truncatula
Medtr6g004930 2.0kb downstream 2.0kb downstream 2000 false chr6: 512096-514095 Medicago truncatula
Medtr6g004930 5.0kb upstream 5.0kb upstream 10731 true chr6: 501365-512095 Medicago truncatula
Medtr6g004930 5.0kb upstream 5.0kb upstream 5000 false chr6: 501365-506364 Medicago truncatula
Medtr6g004930 5.0kb downstream 5.0kb downstream 10731 true chr6: 506365-517095 Medicago truncatula
Medtr6g004930 5.0kb downstream 5.0kb downstream 5000 false chr6: 512096-517095 Medicago truncatula
Medtr6g004930 10.0kb upstream 10.0kb upstream 15731 true chr6: 496365-512095 Medicago truncatula
Medtr6g004930 10.0kb upstream 10.0kb upstream 10000 false chr6: 496365-506364 Medicago truncatula
Medtr6g004930 10.0kb downstream 10.0kb downstream 15731 true chr6: 506365-522095 Medicago truncatula
Medtr6g004930 10.0kb downstream 10.0kb downstream 10000 false chr6: 512096-522095 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307993 5265 Fabidae View MSA
124072607 5270 Rosid View MSA
123737243 5271 Pentapetalae View MSA
122792477 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.183        
cufflinks 3.705        
cufflinks 3.9        
cufflinks 5.587        
cufflinks 3.864        
cufflinks 3.184       Low
cufflinks 5.639        
cufflinks 3.382        
cufflinks 8.154       High

0 Strain