Gene : Medtr6g009540 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR23070:SF44 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Description:  P-loop nucleoside triphosphate hydrolase superfamily protein
Genomic Order:  372 Name:  ? Medtr6g009540
Secondary Identifier:  ? PAC:31102445
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g009540 0.5kb upstream 0.5kb upstream 2644 true chr6: 2840776-2843419 Medicago truncatula
Medtr6g009540 0.5kb upstream 0.5kb upstream 500 false chr6: 2840776-2841275 Medicago truncatula
Medtr6g009540 0.5kb downstream 0.5kb downstream 2644 true chr6: 2841276-2843919 Medicago truncatula
Medtr6g009540 0.5kb downstream 0.5kb downstream 500 false chr6: 2843420-2843919 Medicago truncatula
Medtr6g009540 1.0kb upstream 1.0kb upstream 3144 true chr6: 2840276-2843419 Medicago truncatula
Medtr6g009540 1.0kb upstream 1.0kb upstream 1000 false chr6: 2840276-2841275 Medicago truncatula
Medtr6g009540 1.0kb downstream 1.0kb downstream 3144 true chr6: 2841276-2844419 Medicago truncatula
Medtr6g009540 1.0kb downstream 1.0kb downstream 1000 false chr6: 2843420-2844419 Medicago truncatula
Medtr6g009540 2.0kb upstream 2.0kb upstream 4144 true chr6: 2839276-2843419 Medicago truncatula
Medtr6g009540 2.0kb upstream 2.0kb upstream 2000 false chr6: 2839276-2841275 Medicago truncatula
Medtr6g009540 2.0kb downstream 2.0kb downstream 4144 true chr6: 2841276-2845419 Medicago truncatula
Medtr6g009540 2.0kb downstream 2.0kb downstream 2000 false chr6: 2843420-2845419 Medicago truncatula
Medtr6g009540 5.0kb upstream 5.0kb upstream 7144 true chr6: 2836276-2843419 Medicago truncatula
Medtr6g009540 5.0kb upstream 5.0kb upstream 5000 false chr6: 2836276-2841275 Medicago truncatula
Medtr6g009540 5.0kb downstream 5.0kb downstream 7144 true chr6: 2841276-2848419 Medicago truncatula
Medtr6g009540 5.0kb downstream 5.0kb downstream 5000 false chr6: 2843420-2848419 Medicago truncatula
Medtr6g009540 10.0kb upstream 10.0kb upstream 12144 true chr6: 2831276-2843419 Medicago truncatula
Medtr6g009540 10.0kb upstream 10.0kb upstream 10000 false chr6: 2831276-2841275 Medicago truncatula
Medtr6g009540 10.0kb downstream 10.0kb downstream 12144 true chr6: 2841276-2853419 Medicago truncatula
Medtr6g009540 10.0kb downstream 10.0kb downstream 10000 false chr6: 2843420-2853419 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122794526 5272 Eudicot View MSA
122306441 5265 Fabidae View MSA
124072543 5270 Rosid View MSA
123751074 5271 Pentapetalae View MSA
122051618 5273 Angiosperm View MSA
121350294 5274 Embryophyte View MSA
123428466 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.162        
cufflinks 4.324        
cufflinks 6.93       High
cufflinks 0.32        
cufflinks 3.688        
cufflinks 0.257        
cufflinks 0.314        
cufflinks 6.223       High
cufflinks 0.144       Low

0 Strain