Gene : Medtr5g094400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31791:SF13 - FRIGIDA-LIKE PROTEIN 5 Description:  frigida-LIKE protein
Genomic Order:  5459 Name:  ? Medtr5g094400
Secondary Identifier:  ? PAC:31090168
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g094400 0.5kb upstream 0.5kb upstream 4000 true chr5: 41254864-41258863 Medicago truncatula
Medtr5g094400 0.5kb upstream 0.5kb upstream 500 false chr5: 41254864-41255363 Medicago truncatula
Medtr5g094400 0.5kb downstream 0.5kb downstream 4000 true chr5: 41255364-41259363 Medicago truncatula
Medtr5g094400 0.5kb downstream 0.5kb downstream 500 false chr5: 41258864-41259363 Medicago truncatula
Medtr5g094400 1.0kb upstream 1.0kb upstream 4500 true chr5: 41254364-41258863 Medicago truncatula
Medtr5g094400 1.0kb upstream 1.0kb upstream 1000 false chr5: 41254364-41255363 Medicago truncatula
Medtr5g094400 1.0kb downstream 1.0kb downstream 4500 true chr5: 41255364-41259863 Medicago truncatula
Medtr5g094400 1.0kb downstream 1.0kb downstream 1000 false chr5: 41258864-41259863 Medicago truncatula
Medtr5g094400 2.0kb upstream 2.0kb upstream 5500 true chr5: 41253364-41258863 Medicago truncatula
Medtr5g094400 2.0kb upstream 2.0kb upstream 2000 false chr5: 41253364-41255363 Medicago truncatula
Medtr5g094400 2.0kb downstream 2.0kb downstream 5500 true chr5: 41255364-41260863 Medicago truncatula
Medtr5g094400 2.0kb downstream 2.0kb downstream 2000 false chr5: 41258864-41260863 Medicago truncatula
Medtr5g094400 5.0kb upstream 5.0kb upstream 8500 true chr5: 41250364-41258863 Medicago truncatula
Medtr5g094400 5.0kb upstream 5.0kb upstream 5000 false chr5: 41250364-41255363 Medicago truncatula
Medtr5g094400 5.0kb downstream 5.0kb downstream 8500 true chr5: 41255364-41263863 Medicago truncatula
Medtr5g094400 5.0kb downstream 5.0kb downstream 5000 false chr5: 41258864-41263863 Medicago truncatula
Medtr5g094400 10.0kb upstream 10.0kb upstream 13500 true chr5: 41245364-41258863 Medicago truncatula
Medtr5g094400 10.0kb upstream 10.0kb upstream 10000 false chr5: 41245364-41255363 Medicago truncatula
Medtr5g094400 10.0kb downstream 10.0kb downstream 13500 true chr5: 41255364-41268863 Medicago truncatula
Medtr5g094400 10.0kb downstream 10.0kb downstream 10000 false chr5: 41258864-41268863 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313510 5265 Fabidae View MSA
124072897 5270 Rosid View MSA
123741015 5271 Pentapetalae View MSA
122795482 5272 Eudicot View MSA
122048785 5273 Angiosperm View MSA
121311111 5274 Embryophyte View MSA
123348454 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.566       High
cufflinks 1.219        
cufflinks 1.494        
cufflinks 0.861        
cufflinks 1.818        
cufflinks 0.427       Low
cufflinks 1.079        
cufflinks 1.167        
cufflinks 1.216        

0 Strain