Gene : Medtr5g095010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR30060 - INNER MEMBRANE PROTEIN Description:  nuclear speckle splicing regulatory protein, putative
Genomic Order:  5508 Name:  ? Medtr5g095010
Secondary Identifier:  ? PAC:31087099
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g095010 0.5kb upstream 0.5kb upstream 4630 true chr5: 41533398-41538027 Medicago truncatula
Medtr5g095010 0.5kb upstream 0.5kb upstream 500 false chr5: 41533398-41533897 Medicago truncatula
Medtr5g095010 0.5kb downstream 0.5kb downstream 4630 true chr5: 41533898-41538527 Medicago truncatula
Medtr5g095010 0.5kb downstream 0.5kb downstream 500 false chr5: 41538028-41538527 Medicago truncatula
Medtr5g095010 1.0kb upstream 1.0kb upstream 5130 true chr5: 41532898-41538027 Medicago truncatula
Medtr5g095010 1.0kb upstream 1.0kb upstream 1000 false chr5: 41532898-41533897 Medicago truncatula
Medtr5g095010 1.0kb downstream 1.0kb downstream 5130 true chr5: 41533898-41539027 Medicago truncatula
Medtr5g095010 1.0kb downstream 1.0kb downstream 1000 false chr5: 41538028-41539027 Medicago truncatula
Medtr5g095010 2.0kb upstream 2.0kb upstream 6130 true chr5: 41531898-41538027 Medicago truncatula
Medtr5g095010 2.0kb upstream 2.0kb upstream 2000 false chr5: 41531898-41533897 Medicago truncatula
Medtr5g095010 2.0kb downstream 2.0kb downstream 6130 true chr5: 41533898-41540027 Medicago truncatula
Medtr5g095010 2.0kb downstream 2.0kb downstream 2000 false chr5: 41538028-41540027 Medicago truncatula
Medtr5g095010 5.0kb upstream 5.0kb upstream 9130 true chr5: 41528898-41538027 Medicago truncatula
Medtr5g095010 5.0kb upstream 5.0kb upstream 5000 false chr5: 41528898-41533897 Medicago truncatula
Medtr5g095010 5.0kb downstream 5.0kb downstream 9130 true chr5: 41533898-41543027 Medicago truncatula
Medtr5g095010 5.0kb downstream 5.0kb downstream 5000 false chr5: 41538028-41543027 Medicago truncatula
Medtr5g095010 10.0kb upstream 10.0kb upstream 14130 true chr5: 41523898-41538027 Medicago truncatula
Medtr5g095010 10.0kb upstream 10.0kb upstream 10000 false chr5: 41523898-41533897 Medicago truncatula
Medtr5g095010 10.0kb downstream 10.0kb downstream 14130 true chr5: 41533898-41548027 Medicago truncatula
Medtr5g095010 10.0kb downstream 10.0kb downstream 10000 false chr5: 41538028-41548027 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300672 5265 Fabidae View MSA
124067754 5270 Rosid View MSA
123748299 5271 Pentapetalae View MSA
122787989 5272 Eudicot View MSA
122042336 5273 Angiosperm View MSA
121346143 5274 Embryophyte View MSA
123426491 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.868       High
cufflinks 3.883        
cufflinks 4.442        
cufflinks 5.836        
cufflinks 3.275       Low
cufflinks 3.647        
cufflinks 6.707       High
cufflinks 4.025        
cufflinks 6.195        

0 Strain