Gene : Medtr5g097420 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR32227:SF60 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN Description:  carbohydrate-binding X8 domain protein
Genomic Order:  5695 Name:  ? Medtr5g097420
Secondary Identifier:  ? PAC:31086911
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g097420 0.5kb upstream 0.5kb upstream 2000 true chr5: 42671476-42673475 Medicago truncatula
Medtr5g097420 0.5kb upstream 0.5kb upstream 500 false chr5: 42671476-42671975 Medicago truncatula
Medtr5g097420 0.5kb downstream 0.5kb downstream 2000 true chr5: 42671976-42673975 Medicago truncatula
Medtr5g097420 0.5kb downstream 0.5kb downstream 500 false chr5: 42673476-42673975 Medicago truncatula
Medtr5g097420 1.0kb upstream 1.0kb upstream 2500 true chr5: 42670976-42673475 Medicago truncatula
Medtr5g097420 1.0kb upstream 1.0kb upstream 1000 false chr5: 42670976-42671975 Medicago truncatula
Medtr5g097420 1.0kb downstream 1.0kb downstream 2500 true chr5: 42671976-42674475 Medicago truncatula
Medtr5g097420 1.0kb downstream 1.0kb downstream 1000 false chr5: 42673476-42674475 Medicago truncatula
Medtr5g097420 2.0kb upstream 2.0kb upstream 3500 true chr5: 42669976-42673475 Medicago truncatula
Medtr5g097420 2.0kb upstream 2.0kb upstream 2000 false chr5: 42669976-42671975 Medicago truncatula
Medtr5g097420 2.0kb downstream 2.0kb downstream 3500 true chr5: 42671976-42675475 Medicago truncatula
Medtr5g097420 2.0kb downstream 2.0kb downstream 2000 false chr5: 42673476-42675475 Medicago truncatula
Medtr5g097420 5.0kb upstream 5.0kb upstream 6500 true chr5: 42666976-42673475 Medicago truncatula
Medtr5g097420 5.0kb upstream 5.0kb upstream 5000 false chr5: 42666976-42671975 Medicago truncatula
Medtr5g097420 5.0kb downstream 5.0kb downstream 6500 true chr5: 42671976-42678475 Medicago truncatula
Medtr5g097420 5.0kb downstream 5.0kb downstream 5000 false chr5: 42673476-42678475 Medicago truncatula
Medtr5g097420 10.0kb upstream 10.0kb upstream 11500 true chr5: 42661976-42673475 Medicago truncatula
Medtr5g097420 10.0kb upstream 10.0kb upstream 10000 false chr5: 42661976-42671975 Medicago truncatula
Medtr5g097420 10.0kb downstream 10.0kb downstream 11500 true chr5: 42671976-42683475 Medicago truncatula
Medtr5g097420 10.0kb downstream 10.0kb downstream 10000 false chr5: 42673476-42683475 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312283 5265 Fabidae View MSA
124064522 5270 Rosid View MSA
123739616 5271 Pentapetalae View MSA
122788531 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low Low
cufflinks 6.472        
cufflinks 5.814        
cufflinks 2.111        
cufflinks 4.277        
cufflinks 1.329        
cufflinks 1.674        
cufflinks 5.27        
cufflinks 4.727        

0 Strain