Gene : Medtr5g099180 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR20861:SF1 - HOMOSERINE KINASE Description:  homoserine kinase
Genomic Order:  5816 Name:  ? Medtr5g099180
Secondary Identifier:  ? PAC:31085912
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula HOMOSER-THRESYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3001 Medicago truncatula pathologic  
Mtruncatula PWY-702 Medicago truncatula pathologic  
Mtruncatula PWY-724 Medicago truncatula pathologic  
Mtruncatula THRESYN-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr5g099180 0.5kb upstream 0.5kb upstream 3066 true chr5: 43482375-43485440 Medicago truncatula
Medtr5g099180 0.5kb upstream 0.5kb upstream 500 false chr5: 43482375-43482874 Medicago truncatula
Medtr5g099180 0.5kb downstream 0.5kb downstream 3066 true chr5: 43482875-43485940 Medicago truncatula
Medtr5g099180 0.5kb downstream 0.5kb downstream 500 false chr5: 43485441-43485940 Medicago truncatula
Medtr5g099180 1.0kb upstream 1.0kb upstream 3566 true chr5: 43481875-43485440 Medicago truncatula
Medtr5g099180 1.0kb upstream 1.0kb upstream 1000 false chr5: 43481875-43482874 Medicago truncatula
Medtr5g099180 1.0kb downstream 1.0kb downstream 3566 true chr5: 43482875-43486440 Medicago truncatula
Medtr5g099180 1.0kb downstream 1.0kb downstream 1000 false chr5: 43485441-43486440 Medicago truncatula
Medtr5g099180 2.0kb upstream 2.0kb upstream 4566 true chr5: 43480875-43485440 Medicago truncatula
Medtr5g099180 2.0kb upstream 2.0kb upstream 2000 false chr5: 43480875-43482874 Medicago truncatula
Medtr5g099180 2.0kb downstream 2.0kb downstream 4566 true chr5: 43482875-43487440 Medicago truncatula
Medtr5g099180 2.0kb downstream 2.0kb downstream 2000 false chr5: 43485441-43487440 Medicago truncatula
Medtr5g099180 5.0kb upstream 5.0kb upstream 7566 true chr5: 43477875-43485440 Medicago truncatula
Medtr5g099180 5.0kb upstream 5.0kb upstream 5000 false chr5: 43477875-43482874 Medicago truncatula
Medtr5g099180 5.0kb downstream 5.0kb downstream 7566 true chr5: 43482875-43490440 Medicago truncatula
Medtr5g099180 5.0kb downstream 5.0kb downstream 5000 false chr5: 43485441-43490440 Medicago truncatula
Medtr5g099180 10.0kb upstream 10.0kb upstream 12566 true chr5: 43472875-43485440 Medicago truncatula
Medtr5g099180 10.0kb upstream 10.0kb upstream 10000 false chr5: 43472875-43482874 Medicago truncatula
Medtr5g099180 10.0kb downstream 10.0kb downstream 12566 true chr5: 43482875-43495440 Medicago truncatula
Medtr5g099180 10.0kb downstream 10.0kb downstream 10000 false chr5: 43485441-43495440 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300296 5265 Fabidae View MSA
124063769 5270 Rosid View MSA
123740380 5271 Pentapetalae View MSA
122792807 5272 Eudicot View MSA
122044756 5273 Angiosperm View MSA
121343956 5274 Embryophyte View MSA
123424273 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.91       Low
cufflinks 3.916        
cufflinks 2.231        
cufflinks 2.634        
cufflinks 6.963       High
cufflinks 0.834       Low
cufflinks 2.664        
cufflinks 2.549        
cufflinks 6.452       High

0 Strain