Gene : Medtr6g082450 M. truncatula Mt4.0v1
Defline:  (1 of 13) PF05623 - Protein of unknown function (DUF789) (DUF789) Description:  DUF789 family protein
Genomic Order:  3340 Name:  ? Medtr6g082450
Secondary Identifier:  ? PAC:31101391
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g082450 0.5kb upstream 0.5kb upstream 5787 true chr6: 30862197-30867983 Medicago truncatula
Medtr6g082450 0.5kb upstream 0.5kb upstream 500 false chr6: 30867484-30867983 Medicago truncatula
Medtr6g082450 0.5kb downstream 0.5kb downstream 5787 true chr6: 30861697-30867483 Medicago truncatula
Medtr6g082450 0.5kb downstream 0.5kb downstream 500 false chr6: 30861697-30862196 Medicago truncatula
Medtr6g082450 1.0kb upstream 1.0kb upstream 6287 true chr6: 30862197-30868483 Medicago truncatula
Medtr6g082450 1.0kb upstream 1.0kb upstream 1000 false chr6: 30867484-30868483 Medicago truncatula
Medtr6g082450 1.0kb downstream 1.0kb downstream 6287 true chr6: 30861197-30867483 Medicago truncatula
Medtr6g082450 1.0kb downstream 1.0kb downstream 1000 false chr6: 30861197-30862196 Medicago truncatula
Medtr6g082450 2.0kb upstream 2.0kb upstream 7287 true chr6: 30862197-30869483 Medicago truncatula
Medtr6g082450 2.0kb upstream 2.0kb upstream 2000 false chr6: 30867484-30869483 Medicago truncatula
Medtr6g082450 2.0kb downstream 2.0kb downstream 7287 true chr6: 30860197-30867483 Medicago truncatula
Medtr6g082450 2.0kb downstream 2.0kb downstream 2000 false chr6: 30860197-30862196 Medicago truncatula
Medtr6g082450 5.0kb upstream 5.0kb upstream 10287 true chr6: 30862197-30872483 Medicago truncatula
Medtr6g082450 5.0kb upstream 5.0kb upstream 5000 false chr6: 30867484-30872483 Medicago truncatula
Medtr6g082450 5.0kb downstream 5.0kb downstream 10287 true chr6: 30857197-30867483 Medicago truncatula
Medtr6g082450 5.0kb downstream 5.0kb downstream 5000 false chr6: 30857197-30862196 Medicago truncatula
Medtr6g082450 10.0kb upstream 10.0kb upstream 15287 true chr6: 30862197-30877483 Medicago truncatula
Medtr6g082450 10.0kb upstream 10.0kb upstream 10000 false chr6: 30867484-30877483 Medicago truncatula
Medtr6g082450 10.0kb downstream 10.0kb downstream 15287 true chr6: 30852197-30867483 Medicago truncatula
Medtr6g082450 10.0kb downstream 10.0kb downstream 10000 false chr6: 30852197-30862196 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309977 5265 Fabidae View MSA
124071445 5270 Rosid View MSA
123749810 5271 Pentapetalae View MSA
122797134 5272 Eudicot View MSA
122049051 5273 Angiosperm View MSA
121347224 5274 Embryophyte View MSA
123425809 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.497        
cufflinks 5.821       High
cufflinks 2.797        
cufflinks 0.678        
cufflinks 3.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.459        
cufflinks 3.313        
cufflinks 0.343       Low

0 Strain