Gene : Medtr6g084560 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12121:SF29 - PROTEIN ANGEL Description:  carbon catabolite repressor-like protein
Genomic Order:  3443 Name:  ? Medtr6g084560
Secondary Identifier:  ? PAC:31105691
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g084560 0.5kb upstream 0.5kb upstream 6253 true chr6: 31685155-31691407 Medicago truncatula
Medtr6g084560 0.5kb upstream 0.5kb upstream 500 false chr6: 31685155-31685654 Medicago truncatula
Medtr6g084560 0.5kb downstream 0.5kb downstream 6253 true chr6: 31685655-31691907 Medicago truncatula
Medtr6g084560 0.5kb downstream 0.5kb downstream 500 false chr6: 31691408-31691907 Medicago truncatula
Medtr6g084560 1.0kb upstream 1.0kb upstream 6753 true chr6: 31684655-31691407 Medicago truncatula
Medtr6g084560 1.0kb upstream 1.0kb upstream 1000 false chr6: 31684655-31685654 Medicago truncatula
Medtr6g084560 1.0kb downstream 1.0kb downstream 6753 true chr6: 31685655-31692407 Medicago truncatula
Medtr6g084560 1.0kb downstream 1.0kb downstream 1000 false chr6: 31691408-31692407 Medicago truncatula
Medtr6g084560 2.0kb upstream 2.0kb upstream 7753 true chr6: 31683655-31691407 Medicago truncatula
Medtr6g084560 2.0kb upstream 2.0kb upstream 2000 false chr6: 31683655-31685654 Medicago truncatula
Medtr6g084560 2.0kb downstream 2.0kb downstream 7753 true chr6: 31685655-31693407 Medicago truncatula
Medtr6g084560 2.0kb downstream 2.0kb downstream 2000 false chr6: 31691408-31693407 Medicago truncatula
Medtr6g084560 5.0kb upstream 5.0kb upstream 10753 true chr6: 31680655-31691407 Medicago truncatula
Medtr6g084560 5.0kb upstream 5.0kb upstream 5000 false chr6: 31680655-31685654 Medicago truncatula
Medtr6g084560 5.0kb downstream 5.0kb downstream 10753 true chr6: 31685655-31696407 Medicago truncatula
Medtr6g084560 5.0kb downstream 5.0kb downstream 5000 false chr6: 31691408-31696407 Medicago truncatula
Medtr6g084560 10.0kb upstream 10.0kb upstream 15753 true chr6: 31675655-31691407 Medicago truncatula
Medtr6g084560 10.0kb upstream 10.0kb upstream 10000 false chr6: 31675655-31685654 Medicago truncatula
Medtr6g084560 10.0kb downstream 10.0kb downstream 15753 true chr6: 31685655-31701407 Medicago truncatula
Medtr6g084560 10.0kb downstream 10.0kb downstream 10000 false chr6: 31691408-31701407 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301084 5265 Fabidae View MSA
124064139 5270 Rosid View MSA
123750146 5271 Pentapetalae View MSA
122793805 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.599        
cufflinks 1.093        
cufflinks 1.2       High
cufflinks 0.297       Low
cufflinks 1.271       High
cufflinks 0.26       Low
cufflinks 0.553        
cufflinks 1.014        
cufflinks 0.433        

0 Strain