Gene : Medtr6g086625 M. truncatula Mt4.0v1
Defline:  (1 of 15) 3.2.1.22 - Alpha-galactosidase / Melibiase Description:  alpha-galactosidase-like protein
Genomic Order:  3542 Name:  ? Medtr6g086625
Secondary Identifier:  ? PAC:31103439
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY0-1301 Medicago truncatula pathologic  
Mtruncatula PWY-6527 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g086625 0.5kb upstream 0.5kb upstream 3500 true chr6: 32599747-32603246 Medicago truncatula
Medtr6g086625 0.5kb upstream 0.5kb upstream 500 false chr6: 32602747-32603246 Medicago truncatula
Medtr6g086625 0.5kb downstream 0.5kb downstream 3500 true chr6: 32599247-32602746 Medicago truncatula
Medtr6g086625 0.5kb downstream 0.5kb downstream 500 false chr6: 32599247-32599746 Medicago truncatula
Medtr6g086625 1.0kb upstream 1.0kb upstream 4000 true chr6: 32599747-32603746 Medicago truncatula
Medtr6g086625 1.0kb upstream 1.0kb upstream 1000 false chr6: 32602747-32603746 Medicago truncatula
Medtr6g086625 1.0kb downstream 1.0kb downstream 4000 true chr6: 32598747-32602746 Medicago truncatula
Medtr6g086625 1.0kb downstream 1.0kb downstream 1000 false chr6: 32598747-32599746 Medicago truncatula
Medtr6g086625 2.0kb upstream 2.0kb upstream 5000 true chr6: 32599747-32604746 Medicago truncatula
Medtr6g086625 2.0kb upstream 2.0kb upstream 2000 false chr6: 32602747-32604746 Medicago truncatula
Medtr6g086625 2.0kb downstream 2.0kb downstream 5000 true chr6: 32597747-32602746 Medicago truncatula
Medtr6g086625 2.0kb downstream 2.0kb downstream 2000 false chr6: 32597747-32599746 Medicago truncatula
Medtr6g086625 5.0kb upstream 5.0kb upstream 8000 true chr6: 32599747-32607746 Medicago truncatula
Medtr6g086625 5.0kb upstream 5.0kb upstream 5000 false chr6: 32602747-32607746 Medicago truncatula
Medtr6g086625 5.0kb downstream 5.0kb downstream 8000 true chr6: 32594747-32602746 Medicago truncatula
Medtr6g086625 5.0kb downstream 5.0kb downstream 5000 false chr6: 32594747-32599746 Medicago truncatula
Medtr6g086625 10.0kb upstream 10.0kb upstream 13000 true chr6: 32599747-32612746 Medicago truncatula
Medtr6g086625 10.0kb upstream 10.0kb upstream 10000 false chr6: 32602747-32612746 Medicago truncatula
Medtr6g086625 10.0kb downstream 10.0kb downstream 13000 true chr6: 32589747-32602746 Medicago truncatula
Medtr6g086625 10.0kb downstream 10.0kb downstream 10000 false chr6: 32589747-32599746 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313108 5265 Fabidae View MSA
124073438 5270 Rosid View MSA
123749303 5271 Pentapetalae View MSA
122796981 5272 Eudicot View MSA
122048958 5273 Angiosperm View MSA
121347217 5274 Embryophyte View MSA
123428348 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.65        
cufflinks 0.35        
cufflinks 0.899        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.041     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low Low
cufflinks 0.586        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain