Gene : Medtr6g086455 M. truncatula Mt4.0v1
Defline:  (1 of 72) PF03168 - Late embryogenesis abundant protein (LEA_2) Description:  late embryogenesis abundant protein
Genomic Order:  3530 Name:  ? Medtr6g086455
Secondary Identifier:  ? PAC:31102285
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g086455 0.5kb upstream 0.5kb upstream 4878 true chr6: 32512401-32517278 Medicago truncatula
Medtr6g086455 0.5kb upstream 0.5kb upstream 500 false chr6: 32516779-32517278 Medicago truncatula
Medtr6g086455 0.5kb downstream 0.5kb downstream 4878 true chr6: 32511901-32516778 Medicago truncatula
Medtr6g086455 0.5kb downstream 0.5kb downstream 500 false chr6: 32511901-32512400 Medicago truncatula
Medtr6g086455 1.0kb upstream 1.0kb upstream 5378 true chr6: 32512401-32517778 Medicago truncatula
Medtr6g086455 1.0kb upstream 1.0kb upstream 1000 false chr6: 32516779-32517778 Medicago truncatula
Medtr6g086455 1.0kb downstream 1.0kb downstream 5378 true chr6: 32511401-32516778 Medicago truncatula
Medtr6g086455 1.0kb downstream 1.0kb downstream 1000 false chr6: 32511401-32512400 Medicago truncatula
Medtr6g086455 2.0kb upstream 2.0kb upstream 6378 true chr6: 32512401-32518778 Medicago truncatula
Medtr6g086455 2.0kb upstream 2.0kb upstream 2000 false chr6: 32516779-32518778 Medicago truncatula
Medtr6g086455 2.0kb downstream 2.0kb downstream 6378 true chr6: 32510401-32516778 Medicago truncatula
Medtr6g086455 2.0kb downstream 2.0kb downstream 2000 false chr6: 32510401-32512400 Medicago truncatula
Medtr6g086455 5.0kb upstream 5.0kb upstream 9378 true chr6: 32512401-32521778 Medicago truncatula
Medtr6g086455 5.0kb upstream 5.0kb upstream 5000 false chr6: 32516779-32521778 Medicago truncatula
Medtr6g086455 5.0kb downstream 5.0kb downstream 9378 true chr6: 32507401-32516778 Medicago truncatula
Medtr6g086455 5.0kb downstream 5.0kb downstream 5000 false chr6: 32507401-32512400 Medicago truncatula
Medtr6g086455 10.0kb upstream 10.0kb upstream 14378 true chr6: 32512401-32526778 Medicago truncatula
Medtr6g086455 10.0kb upstream 10.0kb upstream 10000 false chr6: 32516779-32526778 Medicago truncatula
Medtr6g086455 10.0kb downstream 10.0kb downstream 14378 true chr6: 32502401-32516778 Medicago truncatula
Medtr6g086455 10.0kb downstream 10.0kb downstream 10000 false chr6: 32502401-32512400 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308559 5265 Fabidae View MSA
124071575 5270 Rosid View MSA
123738145 5271 Pentapetalae View MSA
122793617 5272 Eudicot View MSA
122049008 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.817       Low
cufflinks 5.102        
cufflinks 6.936        
cufflinks 17.058     High High
cufflinks 4.803        
cufflinks 10.75     High  
cufflinks 6.508        
cufflinks 5.506        
cufflinks 8.586        

0 Strain