Gene : Medtr6g087590 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Description:  tesmin/TSO1-like CXC domain protein
Genomic Order:  3581 Name:  ? Medtr6g087590
Secondary Identifier:  ? PAC:31103976
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g087590 0.5kb upstream 0.5kb upstream 6823 true chr6: 32942177-32948999 Medicago truncatula
Medtr6g087590 0.5kb upstream 0.5kb upstream 500 false chr6: 32942177-32942676 Medicago truncatula
Medtr6g087590 0.5kb downstream 0.5kb downstream 6823 true chr6: 32942677-32949499 Medicago truncatula
Medtr6g087590 0.5kb downstream 0.5kb downstream 500 false chr6: 32949000-32949499 Medicago truncatula
Medtr6g087590 1.0kb upstream 1.0kb upstream 7323 true chr6: 32941677-32948999 Medicago truncatula
Medtr6g087590 1.0kb upstream 1.0kb upstream 1000 false chr6: 32941677-32942676 Medicago truncatula
Medtr6g087590 1.0kb downstream 1.0kb downstream 7323 true chr6: 32942677-32949999 Medicago truncatula
Medtr6g087590 1.0kb downstream 1.0kb downstream 1000 false chr6: 32949000-32949999 Medicago truncatula
Medtr6g087590 2.0kb upstream 2.0kb upstream 8323 true chr6: 32940677-32948999 Medicago truncatula
Medtr6g087590 2.0kb upstream 2.0kb upstream 2000 false chr6: 32940677-32942676 Medicago truncatula
Medtr6g087590 2.0kb downstream 2.0kb downstream 8323 true chr6: 32942677-32950999 Medicago truncatula
Medtr6g087590 2.0kb downstream 2.0kb downstream 2000 false chr6: 32949000-32950999 Medicago truncatula
Medtr6g087590 5.0kb upstream 5.0kb upstream 11323 true chr6: 32937677-32948999 Medicago truncatula
Medtr6g087590 5.0kb upstream 5.0kb upstream 5000 false chr6: 32937677-32942676 Medicago truncatula
Medtr6g087590 5.0kb downstream 5.0kb downstream 11323 true chr6: 32942677-32953999 Medicago truncatula
Medtr6g087590 5.0kb downstream 5.0kb downstream 5000 false chr6: 32949000-32953999 Medicago truncatula
Medtr6g087590 10.0kb upstream 10.0kb upstream 16323 true chr6: 32932677-32948999 Medicago truncatula
Medtr6g087590 10.0kb upstream 10.0kb upstream 10000 false chr6: 32932677-32942676 Medicago truncatula
Medtr6g087590 10.0kb downstream 10.0kb downstream 16323 true chr6: 32942677-32958999 Medicago truncatula
Medtr6g087590 10.0kb downstream 10.0kb downstream 10000 false chr6: 32949000-32958999 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307054 5265 Fabidae View MSA
124069206 5270 Rosid View MSA
123746618 5271 Pentapetalae View MSA
122795390 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.652        
cufflinks 0.583        
cufflinks 0.711        
cufflinks 0.58        
cufflinks 0.731        
cufflinks 0.679        
cufflinks 1.531       High
cufflinks 0.521        
cufflinks 1.816       High

0 Strain