Gene : Medtr6g089780 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13208 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4 Description:  vitamin-D-receptor interacting mediator subunit 4
Genomic Order:  3729 Name:  ? Medtr6g089780
Secondary Identifier:  ? PAC:31105460
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g089780 0.5kb upstream 0.5kb upstream 1703 true chr6: 34078675-34080377 Medicago truncatula
Medtr6g089780 0.5kb upstream 0.5kb upstream 500 false chr6: 34079878-34080377 Medicago truncatula
Medtr6g089780 0.5kb downstream 0.5kb downstream 1703 true chr6: 34078175-34079877 Medicago truncatula
Medtr6g089780 0.5kb downstream 0.5kb downstream 500 false chr6: 34078175-34078674 Medicago truncatula
Medtr6g089780 1.0kb upstream 1.0kb upstream 2203 true chr6: 34078675-34080877 Medicago truncatula
Medtr6g089780 1.0kb upstream 1.0kb upstream 1000 false chr6: 34079878-34080877 Medicago truncatula
Medtr6g089780 1.0kb downstream 1.0kb downstream 2203 true chr6: 34077675-34079877 Medicago truncatula
Medtr6g089780 1.0kb downstream 1.0kb downstream 1000 false chr6: 34077675-34078674 Medicago truncatula
Medtr6g089780 2.0kb upstream 2.0kb upstream 3203 true chr6: 34078675-34081877 Medicago truncatula
Medtr6g089780 2.0kb upstream 2.0kb upstream 2000 false chr6: 34079878-34081877 Medicago truncatula
Medtr6g089780 2.0kb downstream 2.0kb downstream 3203 true chr6: 34076675-34079877 Medicago truncatula
Medtr6g089780 2.0kb downstream 2.0kb downstream 2000 false chr6: 34076675-34078674 Medicago truncatula
Medtr6g089780 5.0kb upstream 5.0kb upstream 6203 true chr6: 34078675-34084877 Medicago truncatula
Medtr6g089780 5.0kb upstream 5.0kb upstream 5000 false chr6: 34079878-34084877 Medicago truncatula
Medtr6g089780 5.0kb downstream 5.0kb downstream 6203 true chr6: 34073675-34079877 Medicago truncatula
Medtr6g089780 5.0kb downstream 5.0kb downstream 5000 false chr6: 34073675-34078674 Medicago truncatula
Medtr6g089780 10.0kb upstream 10.0kb upstream 11203 true chr6: 34078675-34089877 Medicago truncatula
Medtr6g089780 10.0kb upstream 10.0kb upstream 10000 false chr6: 34079878-34089877 Medicago truncatula
Medtr6g089780 10.0kb downstream 10.0kb downstream 11203 true chr6: 34068675-34079877 Medicago truncatula
Medtr6g089780 10.0kb downstream 10.0kb downstream 10000 false chr6: 34068675-34078674 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315116 5265 Fabidae View MSA
124063104 5270 Rosid View MSA
123737443 5271 Pentapetalae View MSA
122786979 5272 Eudicot View MSA
122042269 5273 Angiosperm View MSA
121345208 5274 Embryophyte View MSA
123380175 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.657     High High
cufflinks 9.643     High  
cufflinks 11.775     High High
cufflinks 10.01     High  
cufflinks 8.828        
cufflinks 7.257       Low
cufflinks 7.914       Low
cufflinks 9.935     High  
cufflinks 9.237        

0 Strain