Gene : Medtr6g071070 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR20852//PTHR20852:SF59 - GLUTAMINE SYNTHETASE Description:  glutamine synthetase domain protein
Genomic Order:  2858 Name:  ? Medtr6g071070
Secondary Identifier:  ? PAC:31103933
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6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula GLNSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-3282 Medicago truncatula pathologic  
Mtruncatula PWY-381 Medicago truncatula pathologic  
Mtruncatula PWY-6549 Medicago truncatula pathologic  
Mtruncatula PWY-6963 Medicago truncatula pathologic  
Mtruncatula PWY-6964 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g071070 0.5kb upstream 0.5kb upstream 5319 true chr6: 26246690-26252008 Medicago truncatula
Medtr6g071070 0.5kb upstream 0.5kb upstream 500 false chr6: 26251509-26252008 Medicago truncatula
Medtr6g071070 0.5kb downstream 0.5kb downstream 5319 true chr6: 26246190-26251508 Medicago truncatula
Medtr6g071070 0.5kb downstream 0.5kb downstream 500 false chr6: 26246190-26246689 Medicago truncatula
Medtr6g071070 1.0kb upstream 1.0kb upstream 5819 true chr6: 26246690-26252508 Medicago truncatula
Medtr6g071070 1.0kb upstream 1.0kb upstream 1000 false chr6: 26251509-26252508 Medicago truncatula
Medtr6g071070 1.0kb downstream 1.0kb downstream 5819 true chr6: 26245690-26251508 Medicago truncatula
Medtr6g071070 1.0kb downstream 1.0kb downstream 1000 false chr6: 26245690-26246689 Medicago truncatula
Medtr6g071070 2.0kb upstream 2.0kb upstream 6819 true chr6: 26246690-26253508 Medicago truncatula
Medtr6g071070 2.0kb upstream 2.0kb upstream 2000 false chr6: 26251509-26253508 Medicago truncatula
Medtr6g071070 2.0kb downstream 2.0kb downstream 6819 true chr6: 26244690-26251508 Medicago truncatula
Medtr6g071070 2.0kb downstream 2.0kb downstream 2000 false chr6: 26244690-26246689 Medicago truncatula
Medtr6g071070 5.0kb upstream 5.0kb upstream 9819 true chr6: 26246690-26256508 Medicago truncatula
Medtr6g071070 5.0kb upstream 5.0kb upstream 5000 false chr6: 26251509-26256508 Medicago truncatula
Medtr6g071070 5.0kb downstream 5.0kb downstream 9819 true chr6: 26241690-26251508 Medicago truncatula
Medtr6g071070 5.0kb downstream 5.0kb downstream 5000 false chr6: 26241690-26246689 Medicago truncatula
Medtr6g071070 10.0kb upstream 10.0kb upstream 14819 true chr6: 26246690-26261508 Medicago truncatula
Medtr6g071070 10.0kb upstream 10.0kb upstream 10000 false chr6: 26251509-26261508 Medicago truncatula
Medtr6g071070 10.0kb downstream 10.0kb downstream 14819 true chr6: 26236690-26251508 Medicago truncatula
Medtr6g071070 10.0kb downstream 10.0kb downstream 10000 false chr6: 26236690-26246689 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309647 5265 Fabidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 373.172     High High
cufflinks 24.089     High Low
cufflinks 56.421     High  
cufflinks 134.407     High  
cufflinks 33.486     High  
cufflinks 53.005     High  
cufflinks 101.741     High  
cufflinks 31.947     High  
cufflinks 97.845     High  

0 Strain