Gene : Medtr6g079520 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11467//PTHR11467:SF33 - HISTONE H1/H5 Description:  linker histone H1 and h5 family protein
Genomic Order:  3250 Name:  ? Medtr6g079520
Secondary Identifier:  ? PAC:31102340
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g079520 0.5kb upstream 0.5kb upstream 7055 true chr6: 29988572-29995626 Medicago truncatula
Medtr6g079520 0.5kb upstream 0.5kb upstream 500 false chr6: 29988572-29989071 Medicago truncatula
Medtr6g079520 0.5kb downstream 0.5kb downstream 7055 true chr6: 29989072-29996126 Medicago truncatula
Medtr6g079520 0.5kb downstream 0.5kb downstream 500 false chr6: 29995627-29996126 Medicago truncatula
Medtr6g079520 1.0kb upstream 1.0kb upstream 7555 true chr6: 29988072-29995626 Medicago truncatula
Medtr6g079520 1.0kb upstream 1.0kb upstream 1000 false chr6: 29988072-29989071 Medicago truncatula
Medtr6g079520 1.0kb downstream 1.0kb downstream 7555 true chr6: 29989072-29996626 Medicago truncatula
Medtr6g079520 1.0kb downstream 1.0kb downstream 1000 false chr6: 29995627-29996626 Medicago truncatula
Medtr6g079520 2.0kb upstream 2.0kb upstream 8555 true chr6: 29987072-29995626 Medicago truncatula
Medtr6g079520 2.0kb upstream 2.0kb upstream 2000 false chr6: 29987072-29989071 Medicago truncatula
Medtr6g079520 2.0kb downstream 2.0kb downstream 8555 true chr6: 29989072-29997626 Medicago truncatula
Medtr6g079520 2.0kb downstream 2.0kb downstream 2000 false chr6: 29995627-29997626 Medicago truncatula
Medtr6g079520 5.0kb upstream 5.0kb upstream 11555 true chr6: 29984072-29995626 Medicago truncatula
Medtr6g079520 5.0kb upstream 5.0kb upstream 5000 false chr6: 29984072-29989071 Medicago truncatula
Medtr6g079520 5.0kb downstream 5.0kb downstream 11555 true chr6: 29989072-30000626 Medicago truncatula
Medtr6g079520 5.0kb downstream 5.0kb downstream 5000 false chr6: 29995627-30000626 Medicago truncatula
Medtr6g079520 10.0kb upstream 10.0kb upstream 16555 true chr6: 29979072-29995626 Medicago truncatula
Medtr6g079520 10.0kb upstream 10.0kb upstream 10000 false chr6: 29979072-29989071 Medicago truncatula
Medtr6g079520 10.0kb downstream 10.0kb downstream 16555 true chr6: 29989072-30005626 Medicago truncatula
Medtr6g079520 10.0kb downstream 10.0kb downstream 10000 false chr6: 29995627-30005626 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029847 5273 Angiosperm View MSA
122311965 5265 Fabidae View MSA
124072577 5270 Rosid View MSA
123747528 5271 Pentapetalae View MSA
122795088 5272 Eudicot View MSA
121350617 5274 Embryophyte View MSA
123428771 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.519     High High
cufflinks 7.611        
cufflinks 5.273       Low
cufflinks 15.048     High  
cufflinks 7.484        
cufflinks 5.61        
cufflinks 8.962        
cufflinks 6.127        
cufflinks 13.165     High  

0 Strain