Gene : Medtr6g081410 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR11206//PTHR11206:SF137 - MULTIDRUG RESISTANCE PROTEIN Description:  MATE efflux family protein
Genomic Order:  3294 Name:  ? Medtr6g081410
Secondary Identifier:  ? PAC:31102327
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g081410 0.5kb upstream 0.5kb upstream 7275 true chr6: 30482425-30489699 Medicago truncatula
Medtr6g081410 0.5kb upstream 0.5kb upstream 500 false chr6: 30489200-30489699 Medicago truncatula
Medtr6g081410 0.5kb downstream 0.5kb downstream 7275 true chr6: 30481925-30489199 Medicago truncatula
Medtr6g081410 0.5kb downstream 0.5kb downstream 500 false chr6: 30481925-30482424 Medicago truncatula
Medtr6g081410 1.0kb upstream 1.0kb upstream 7775 true chr6: 30482425-30490199 Medicago truncatula
Medtr6g081410 1.0kb upstream 1.0kb upstream 1000 false chr6: 30489200-30490199 Medicago truncatula
Medtr6g081410 1.0kb downstream 1.0kb downstream 7775 true chr6: 30481425-30489199 Medicago truncatula
Medtr6g081410 1.0kb downstream 1.0kb downstream 1000 false chr6: 30481425-30482424 Medicago truncatula
Medtr6g081410 2.0kb upstream 2.0kb upstream 8775 true chr6: 30482425-30491199 Medicago truncatula
Medtr6g081410 2.0kb upstream 2.0kb upstream 2000 false chr6: 30489200-30491199 Medicago truncatula
Medtr6g081410 2.0kb downstream 2.0kb downstream 8775 true chr6: 30480425-30489199 Medicago truncatula
Medtr6g081410 2.0kb downstream 2.0kb downstream 2000 false chr6: 30480425-30482424 Medicago truncatula
Medtr6g081410 5.0kb upstream 5.0kb upstream 11775 true chr6: 30482425-30494199 Medicago truncatula
Medtr6g081410 5.0kb upstream 5.0kb upstream 5000 false chr6: 30489200-30494199 Medicago truncatula
Medtr6g081410 5.0kb downstream 5.0kb downstream 11775 true chr6: 30477425-30489199 Medicago truncatula
Medtr6g081410 5.0kb downstream 5.0kb downstream 5000 false chr6: 30477425-30482424 Medicago truncatula
Medtr6g081410 10.0kb upstream 10.0kb upstream 16775 true chr6: 30482425-30499199 Medicago truncatula
Medtr6g081410 10.0kb upstream 10.0kb upstream 10000 false chr6: 30489200-30499199 Medicago truncatula
Medtr6g081410 10.0kb downstream 10.0kb downstream 16775 true chr6: 30472425-30489199 Medicago truncatula
Medtr6g081410 10.0kb downstream 10.0kb downstream 10000 false chr6: 30472425-30482424 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303987 5265 Fabidae View MSA
124062797 5270 Rosid View MSA
123744234 5271 Pentapetalae View MSA
122796569 5272 Eudicot View MSA
122043980 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.011     Low  
cufflinks 0.226        
cufflinks 0.174        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.362        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.002     Low Low
cufflinks 0.207        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain