Gene : Medtr6g080420 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23115//PTHR23115:SF133 - TRANSLATION FACTOR Description:  elongation factor Tu (EF-Tu) GTP-binding family protein
Genomic Order:  3276 Name:  ? Medtr6g080420
Secondary Identifier:  ? PAC:31103357
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g080420 0.5kb upstream 0.5kb upstream 13315 true chr6: 30323834-30337148 Medicago truncatula
Medtr6g080420 0.5kb upstream 0.5kb upstream 500 false chr6: 30323834-30324333 Medicago truncatula
Medtr6g080420 0.5kb downstream 0.5kb downstream 13315 true chr6: 30324334-30337648 Medicago truncatula
Medtr6g080420 0.5kb downstream 0.5kb downstream 500 false chr6: 30337149-30337648 Medicago truncatula
Medtr6g080420 1.0kb upstream 1.0kb upstream 13815 true chr6: 30323334-30337148 Medicago truncatula
Medtr6g080420 1.0kb upstream 1.0kb upstream 1000 false chr6: 30323334-30324333 Medicago truncatula
Medtr6g080420 1.0kb downstream 1.0kb downstream 13815 true chr6: 30324334-30338148 Medicago truncatula
Medtr6g080420 1.0kb downstream 1.0kb downstream 1000 false chr6: 30337149-30338148 Medicago truncatula
Medtr6g080420 2.0kb upstream 2.0kb upstream 14815 true chr6: 30322334-30337148 Medicago truncatula
Medtr6g080420 2.0kb upstream 2.0kb upstream 2000 false chr6: 30322334-30324333 Medicago truncatula
Medtr6g080420 2.0kb downstream 2.0kb downstream 14815 true chr6: 30324334-30339148 Medicago truncatula
Medtr6g080420 2.0kb downstream 2.0kb downstream 2000 false chr6: 30337149-30339148 Medicago truncatula
Medtr6g080420 5.0kb upstream 5.0kb upstream 17815 true chr6: 30319334-30337148 Medicago truncatula
Medtr6g080420 5.0kb upstream 5.0kb upstream 5000 false chr6: 30319334-30324333 Medicago truncatula
Medtr6g080420 5.0kb downstream 5.0kb downstream 17815 true chr6: 30324334-30342148 Medicago truncatula
Medtr6g080420 5.0kb downstream 5.0kb downstream 5000 false chr6: 30337149-30342148 Medicago truncatula
Medtr6g080420 10.0kb upstream 10.0kb upstream 22815 true chr6: 30314334-30337148 Medicago truncatula
Medtr6g080420 10.0kb upstream 10.0kb upstream 10000 false chr6: 30314334-30324333 Medicago truncatula
Medtr6g080420 10.0kb downstream 10.0kb downstream 22815 true chr6: 30324334-30347148 Medicago truncatula
Medtr6g080420 10.0kb downstream 10.0kb downstream 10000 false chr6: 30337149-30347148 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122294758 5265 Fabidae View MSA
124064938 5270 Rosid View MSA
123740720 5271 Pentapetalae View MSA
122785683 5272 Eudicot View MSA
122047327 5273 Angiosperm View MSA
121343812 5274 Embryophyte View MSA
123423812 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.458       High
cufflinks 1.606        
cufflinks 1.499        
cufflinks 0.688       Low
cufflinks 2.014        
cufflinks 0.795       Low
cufflinks 1.565        
cufflinks 1.414        
cufflinks 1.397        

0 Strain