Gene : Medtr6g047750 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31636:SF4 - SCARECROW-LIKE PROTEIN 8 Description:  GRAS family transcription factor
Genomic Order:  2050 Name:  ? Medtr6g047750
Secondary Identifier:  ? PAC:31105095
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g047750 0.5kb upstream 0.5kb upstream 2945 true chr6: 17217191-17220135 Medicago truncatula
Medtr6g047750 0.5kb upstream 0.5kb upstream 500 false chr6: 17217191-17217690 Medicago truncatula
Medtr6g047750 0.5kb downstream 0.5kb downstream 2945 true chr6: 17217691-17220635 Medicago truncatula
Medtr6g047750 0.5kb downstream 0.5kb downstream 500 false chr6: 17220136-17220635 Medicago truncatula
Medtr6g047750 1.0kb upstream 1.0kb upstream 3445 true chr6: 17216691-17220135 Medicago truncatula
Medtr6g047750 1.0kb upstream 1.0kb upstream 1000 false chr6: 17216691-17217690 Medicago truncatula
Medtr6g047750 1.0kb downstream 1.0kb downstream 3445 true chr6: 17217691-17221135 Medicago truncatula
Medtr6g047750 1.0kb downstream 1.0kb downstream 1000 false chr6: 17220136-17221135 Medicago truncatula
Medtr6g047750 2.0kb upstream 2.0kb upstream 4445 true chr6: 17215691-17220135 Medicago truncatula
Medtr6g047750 2.0kb upstream 2.0kb upstream 2000 false chr6: 17215691-17217690 Medicago truncatula
Medtr6g047750 2.0kb downstream 2.0kb downstream 4445 true chr6: 17217691-17222135 Medicago truncatula
Medtr6g047750 2.0kb downstream 2.0kb downstream 2000 false chr6: 17220136-17222135 Medicago truncatula
Medtr6g047750 5.0kb upstream 5.0kb upstream 7445 true chr6: 17212691-17220135 Medicago truncatula
Medtr6g047750 5.0kb upstream 5.0kb upstream 5000 false chr6: 17212691-17217690 Medicago truncatula
Medtr6g047750 5.0kb downstream 5.0kb downstream 7445 true chr6: 17217691-17225135 Medicago truncatula
Medtr6g047750 5.0kb downstream 5.0kb downstream 5000 false chr6: 17220136-17225135 Medicago truncatula
Medtr6g047750 10.0kb upstream 10.0kb upstream 12445 true chr6: 17207691-17220135 Medicago truncatula
Medtr6g047750 10.0kb upstream 10.0kb upstream 10000 false chr6: 17207691-17217690 Medicago truncatula
Medtr6g047750 10.0kb downstream 10.0kb downstream 12445 true chr6: 17217691-17230135 Medicago truncatula
Medtr6g047750 10.0kb downstream 10.0kb downstream 10000 false chr6: 17220136-17230135 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308664 5265 Fabidae View MSA
124062619 5270 Rosid View MSA
123752771 5271 Pentapetalae View MSA
122794202 5272 Eudicot View MSA
122051595 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 91.53     High High
cufflinks 8.381        
cufflinks 9.79        
cufflinks 22.316     High  
cufflinks 12.283     High  
cufflinks 9.716        
cufflinks 32.755     High  
cufflinks 5.838       Low
cufflinks 36.098     High  

0 Strain