Gene : Medtr6g059380 M. truncatula Mt4.0v1

Defline:  (1 of 1) PTHR22951//PTHR22951:SF14 - CLATHRIN ASSEMBLY PROTEIN Description:  ENTH/ANTH/VHS superfamily protein
Genomic Order:  2353 Name:  ? Medtr6g059380
Secondary Identifier:  ? PAC:31101777

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g059380 0.5kb upstream 0.5kb upstream 3065 true chr6: 20388049-20391113 Medicago truncatula
Medtr6g059380 0.5kb upstream 0.5kb upstream 500 false chr6: 20388049-20388548 Medicago truncatula
Medtr6g059380 0.5kb downstream 0.5kb downstream 3065 true chr6: 20388549-20391613 Medicago truncatula
Medtr6g059380 0.5kb downstream 0.5kb downstream 500 false chr6: 20391114-20391613 Medicago truncatula
Medtr6g059380 1.0kb upstream 1.0kb upstream 3565 true chr6: 20387549-20391113 Medicago truncatula
Medtr6g059380 1.0kb upstream 1.0kb upstream 1000 false chr6: 20387549-20388548 Medicago truncatula
Medtr6g059380 1.0kb downstream 1.0kb downstream 3565 true chr6: 20388549-20392113 Medicago truncatula
Medtr6g059380 1.0kb downstream 1.0kb downstream 1000 false chr6: 20391114-20392113 Medicago truncatula
Medtr6g059380 2.0kb upstream 2.0kb upstream 4565 true chr6: 20386549-20391113 Medicago truncatula
Medtr6g059380 2.0kb upstream 2.0kb upstream 2000 false chr6: 20386549-20388548 Medicago truncatula
Medtr6g059380 2.0kb downstream 2.0kb downstream 4565 true chr6: 20388549-20393113 Medicago truncatula
Medtr6g059380 2.0kb downstream 2.0kb downstream 2000 false chr6: 20391114-20393113 Medicago truncatula
Medtr6g059380 5.0kb upstream 5.0kb upstream 7565 true chr6: 20383549-20391113 Medicago truncatula
Medtr6g059380 5.0kb upstream 5.0kb upstream 5000 false chr6: 20383549-20388548 Medicago truncatula
Medtr6g059380 5.0kb downstream 5.0kb downstream 7565 true chr6: 20388549-20396113 Medicago truncatula
Medtr6g059380 5.0kb downstream 5.0kb downstream 5000 false chr6: 20391114-20396113 Medicago truncatula
Medtr6g059380 10.0kb upstream 10.0kb upstream 12565 true chr6: 20378549-20391113 Medicago truncatula
Medtr6g059380 10.0kb upstream 10.0kb upstream 10000 false chr6: 20378549-20388548 Medicago truncatula
Medtr6g059380 10.0kb downstream 10.0kb downstream 12565 true chr6: 20388549-20401113 Medicago truncatula
Medtr6g059380 10.0kb downstream 10.0kb downstream 10000 false chr6: 20391114-20401113 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296424 5265 Fabidae View MSA
124062838 5270 Rosid View MSA
123748720 5271 Pentapetalae View MSA
122791986 5272 Eudicot View MSA
122050883 5273 Angiosperm View MSA
121351758 5274 Embryophyte View MSA
123382309 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096        
cufflinks 0.061     Low  
cufflinks 0.264       High
cufflinks 0.047     Low Low
cufflinks 0.115        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.135        
cufflinks 0.065        
cufflinks 0.192       High

0 Strain