Gene : Medtr6g060178 M. truncatula Mt4.0v1
Description:  viral A-type inclusion repeat protein, putative Genomic Order:  2406
Name:  ? Medtr6g060178 Secondary Identifier:  ? PAC:31105706
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0 Pathways

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g060178 0.5kb upstream 0.5kb upstream 4996 true chr6: 20673009-20678004 Medicago truncatula
Medtr6g060178 0.5kb upstream 0.5kb upstream 500 false chr6: 20677505-20678004 Medicago truncatula
Medtr6g060178 0.5kb downstream 0.5kb downstream 4996 true chr6: 20672509-20677504 Medicago truncatula
Medtr6g060178 0.5kb downstream 0.5kb downstream 500 false chr6: 20672509-20673008 Medicago truncatula
Medtr6g060178 1.0kb upstream 1.0kb upstream 5496 true chr6: 20673009-20678504 Medicago truncatula
Medtr6g060178 1.0kb upstream 1.0kb upstream 1000 false chr6: 20677505-20678504 Medicago truncatula
Medtr6g060178 1.0kb downstream 1.0kb downstream 5496 true chr6: 20672009-20677504 Medicago truncatula
Medtr6g060178 1.0kb downstream 1.0kb downstream 1000 false chr6: 20672009-20673008 Medicago truncatula
Medtr6g060178 2.0kb upstream 2.0kb upstream 6496 true chr6: 20673009-20679504 Medicago truncatula
Medtr6g060178 2.0kb upstream 2.0kb upstream 2000 false chr6: 20677505-20679504 Medicago truncatula
Medtr6g060178 2.0kb downstream 2.0kb downstream 6496 true chr6: 20671009-20677504 Medicago truncatula
Medtr6g060178 2.0kb downstream 2.0kb downstream 2000 false chr6: 20671009-20673008 Medicago truncatula
Medtr6g060178 5.0kb upstream 5.0kb upstream 9496 true chr6: 20673009-20682504 Medicago truncatula
Medtr6g060178 5.0kb upstream 5.0kb upstream 5000 false chr6: 20677505-20682504 Medicago truncatula
Medtr6g060178 5.0kb downstream 5.0kb downstream 9496 true chr6: 20668009-20677504 Medicago truncatula
Medtr6g060178 5.0kb downstream 5.0kb downstream 5000 false chr6: 20668009-20673008 Medicago truncatula
Medtr6g060178 10.0kb upstream 10.0kb upstream 14496 true chr6: 20673009-20687504 Medicago truncatula
Medtr6g060178 10.0kb upstream 10.0kb upstream 10000 false chr6: 20677505-20687504 Medicago truncatula
Medtr6g060178 10.0kb downstream 10.0kb downstream 14496 true chr6: 20663009-20677504 Medicago truncatula
Medtr6g060178 10.0kb downstream 10.0kb downstream 10000 false chr6: 20663009-20673008 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026208 5273 Angiosperm View MSA
122300341 5265 Fabidae View MSA
124069800 5270 Rosid View MSA
123741961 5271 Pentapetalae View MSA
122795095 5272 Eudicot View MSA
121349870 5274 Embryophyte View MSA
123381480 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.007     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain