Gene : Medtr6g068850 M. truncatula Mt4.0v1
Defline:  (1 of 9) PF05347 - Complex 1 protein (LYR family) (Complex1_LYR) Description:  complex 1 LYR-like protein
Genomic Order:  2725 Name:  ? Medtr6g068850
Secondary Identifier:  ? PAC:31101628
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g068850 0.5kb upstream 0.5kb upstream 3544 true chr6: 24744386-24747929 Medicago truncatula
Medtr6g068850 0.5kb upstream 0.5kb upstream 500 false chr6: 24744386-24744885 Medicago truncatula
Medtr6g068850 0.5kb downstream 0.5kb downstream 3544 true chr6: 24744886-24748429 Medicago truncatula
Medtr6g068850 0.5kb downstream 0.5kb downstream 500 false chr6: 24747930-24748429 Medicago truncatula
Medtr6g068850 1.0kb upstream 1.0kb upstream 4044 true chr6: 24743886-24747929 Medicago truncatula
Medtr6g068850 1.0kb upstream 1.0kb upstream 1000 false chr6: 24743886-24744885 Medicago truncatula
Medtr6g068850 1.0kb downstream 1.0kb downstream 4044 true chr6: 24744886-24748929 Medicago truncatula
Medtr6g068850 1.0kb downstream 1.0kb downstream 1000 false chr6: 24747930-24748929 Medicago truncatula
Medtr6g068850 2.0kb upstream 2.0kb upstream 5044 true chr6: 24742886-24747929 Medicago truncatula
Medtr6g068850 2.0kb upstream 2.0kb upstream 2000 false chr6: 24742886-24744885 Medicago truncatula
Medtr6g068850 2.0kb downstream 2.0kb downstream 5044 true chr6: 24744886-24749929 Medicago truncatula
Medtr6g068850 2.0kb downstream 2.0kb downstream 2000 false chr6: 24747930-24749929 Medicago truncatula
Medtr6g068850 5.0kb upstream 5.0kb upstream 8044 true chr6: 24739886-24747929 Medicago truncatula
Medtr6g068850 5.0kb upstream 5.0kb upstream 5000 false chr6: 24739886-24744885 Medicago truncatula
Medtr6g068850 5.0kb downstream 5.0kb downstream 8044 true chr6: 24744886-24752929 Medicago truncatula
Medtr6g068850 5.0kb downstream 5.0kb downstream 5000 false chr6: 24747930-24752929 Medicago truncatula
Medtr6g068850 10.0kb upstream 10.0kb upstream 13044 true chr6: 24734886-24747929 Medicago truncatula
Medtr6g068850 10.0kb upstream 10.0kb upstream 10000 false chr6: 24734886-24744885 Medicago truncatula
Medtr6g068850 10.0kb downstream 10.0kb downstream 13044 true chr6: 24744886-24757929 Medicago truncatula
Medtr6g068850 10.0kb downstream 10.0kb downstream 10000 false chr6: 24747930-24757929 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305454 5265 Fabidae View MSA
124063359 5270 Rosid View MSA
123753617 5271 Pentapetalae View MSA
122788417 5272 Eudicot View MSA
122042390 5273 Angiosperm View MSA
121351633 5274 Embryophyte View MSA
123426034 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.692       High
cufflinks 1.547        
cufflinks 1.783        
cufflinks 1.95        
cufflinks 2.675        
cufflinks 1.164       Low
cufflinks 4.679       High
cufflinks 1.346       Low
cufflinks 3.133        

0 Strain