Gene : Medtr6g033320 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21649:SF7 - CHLOROPHYLL A-B BINDING PROTEIN 6, CHLOROPLASTIC Description:  light-harvesting complex I chlorophyll A/B-binding protein
Genomic Order:  1376 Name:  ? Medtr6g033320
Secondary Identifier:  ? PAC:31103368
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g033320 0.5kb upstream 0.5kb upstream 3195 true chr6: 10650230-10653424 Medicago truncatula
Medtr6g033320 0.5kb upstream 0.5kb upstream 500 false chr6: 10652925-10653424 Medicago truncatula
Medtr6g033320 0.5kb downstream 0.5kb downstream 3195 true chr6: 10649730-10652924 Medicago truncatula
Medtr6g033320 0.5kb downstream 0.5kb downstream 500 false chr6: 10649730-10650229 Medicago truncatula
Medtr6g033320 1.0kb upstream 1.0kb upstream 3695 true chr6: 10650230-10653924 Medicago truncatula
Medtr6g033320 1.0kb upstream 1.0kb upstream 1000 false chr6: 10652925-10653924 Medicago truncatula
Medtr6g033320 1.0kb downstream 1.0kb downstream 3695 true chr6: 10649230-10652924 Medicago truncatula
Medtr6g033320 1.0kb downstream 1.0kb downstream 1000 false chr6: 10649230-10650229 Medicago truncatula
Medtr6g033320 2.0kb upstream 2.0kb upstream 4695 true chr6: 10650230-10654924 Medicago truncatula
Medtr6g033320 2.0kb upstream 2.0kb upstream 2000 false chr6: 10652925-10654924 Medicago truncatula
Medtr6g033320 2.0kb downstream 2.0kb downstream 4695 true chr6: 10648230-10652924 Medicago truncatula
Medtr6g033320 2.0kb downstream 2.0kb downstream 2000 false chr6: 10648230-10650229 Medicago truncatula
Medtr6g033320 5.0kb upstream 5.0kb upstream 7695 true chr6: 10650230-10657924 Medicago truncatula
Medtr6g033320 5.0kb upstream 5.0kb upstream 5000 false chr6: 10652925-10657924 Medicago truncatula
Medtr6g033320 5.0kb downstream 5.0kb downstream 7695 true chr6: 10645230-10652924 Medicago truncatula
Medtr6g033320 5.0kb downstream 5.0kb downstream 5000 false chr6: 10645230-10650229 Medicago truncatula
Medtr6g033320 10.0kb upstream 10.0kb upstream 12695 true chr6: 10650230-10662924 Medicago truncatula
Medtr6g033320 10.0kb upstream 10.0kb upstream 10000 false chr6: 10652925-10662924 Medicago truncatula
Medtr6g033320 10.0kb downstream 10.0kb downstream 12695 true chr6: 10640230-10652924 Medicago truncatula
Medtr6g033320 10.0kb downstream 10.0kb downstream 10000 false chr6: 10640230-10650229 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301540 5265 Fabidae View MSA
124067443 5270 Rosid View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 973.884     High  
cufflinks 515.384     High  
cufflinks 0.06     Low  
cufflinks 1159.093     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.156        
cufflinks 681.615     High  
cufflinks 0.121        

0 Strain