Gene : Medtr6g035370 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR21654:SF19 - DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN Description:  myb/SANT-like DNA-binding domain protein
Genomic Order:  1580 Name:  ? Medtr6g035370
Secondary Identifier:  ? PAC:31105638
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g035370 0.5kb upstream 0.5kb upstream 4162 true chr6: 12680052-12684213 Medicago truncatula
Medtr6g035370 0.5kb upstream 0.5kb upstream 500 false chr6: 12680052-12680551 Medicago truncatula
Medtr6g035370 0.5kb downstream 0.5kb downstream 4162 true chr6: 12680552-12684713 Medicago truncatula
Medtr6g035370 0.5kb downstream 0.5kb downstream 500 false chr6: 12684214-12684713 Medicago truncatula
Medtr6g035370 1.0kb upstream 1.0kb upstream 4662 true chr6: 12679552-12684213 Medicago truncatula
Medtr6g035370 1.0kb upstream 1.0kb upstream 1000 false chr6: 12679552-12680551 Medicago truncatula
Medtr6g035370 1.0kb downstream 1.0kb downstream 4662 true chr6: 12680552-12685213 Medicago truncatula
Medtr6g035370 1.0kb downstream 1.0kb downstream 1000 false chr6: 12684214-12685213 Medicago truncatula
Medtr6g035370 2.0kb upstream 2.0kb upstream 5662 true chr6: 12678552-12684213 Medicago truncatula
Medtr6g035370 2.0kb upstream 2.0kb upstream 2000 false chr6: 12678552-12680551 Medicago truncatula
Medtr6g035370 2.0kb downstream 2.0kb downstream 5662 true chr6: 12680552-12686213 Medicago truncatula
Medtr6g035370 2.0kb downstream 2.0kb downstream 2000 false chr6: 12684214-12686213 Medicago truncatula
Medtr6g035370 5.0kb upstream 5.0kb upstream 8662 true chr6: 12675552-12684213 Medicago truncatula
Medtr6g035370 5.0kb upstream 5.0kb upstream 5000 false chr6: 12675552-12680551 Medicago truncatula
Medtr6g035370 5.0kb downstream 5.0kb downstream 8662 true chr6: 12680552-12689213 Medicago truncatula
Medtr6g035370 5.0kb downstream 5.0kb downstream 5000 false chr6: 12684214-12689213 Medicago truncatula
Medtr6g035370 10.0kb upstream 10.0kb upstream 13662 true chr6: 12670552-12684213 Medicago truncatula
Medtr6g035370 10.0kb upstream 10.0kb upstream 10000 false chr6: 12670552-12680551 Medicago truncatula
Medtr6g035370 10.0kb downstream 10.0kb downstream 13662 true chr6: 12680552-12694213 Medicago truncatula
Medtr6g035370 10.0kb downstream 10.0kb downstream 10000 false chr6: 12684214-12694213 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313930 5265 Fabidae View MSA
124065678 5270 Rosid View MSA
123736758 5271 Pentapetalae View MSA
122796091 5272 Eudicot View MSA
122051331 5273 Angiosperm View MSA
121349901 5274 Embryophyte View MSA
123381491 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.321       Low
cufflinks 27.765     High  
cufflinks 37.747     High  
cufflinks 5.494        
cufflinks 50.562     High High
cufflinks 1.563       Low
cufflinks 6.94        
cufflinks 36.147     High  
cufflinks 5.178        

0 Strain