Gene : Medtr7g088700 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF14639 - Holliday-junction resolvase-like of SPT6 (YqgF) Description:  global transcription factor
Genomic Order:  4159 Name:  ? Medtr7g088700
Secondary Identifier:  ? PAC:31081694
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g088700 0.5kb upstream 0.5kb upstream 11942 true chr7: 34580098-34592039 Medicago truncatula
Medtr7g088700 0.5kb upstream 0.5kb upstream 500 false chr7: 34591540-34592039 Medicago truncatula
Medtr7g088700 0.5kb downstream 0.5kb downstream 11942 true chr7: 34579598-34591539 Medicago truncatula
Medtr7g088700 0.5kb downstream 0.5kb downstream 500 false chr7: 34579598-34580097 Medicago truncatula
Medtr7g088700 1.0kb upstream 1.0kb upstream 12442 true chr7: 34580098-34592539 Medicago truncatula
Medtr7g088700 1.0kb upstream 1.0kb upstream 1000 false chr7: 34591540-34592539 Medicago truncatula
Medtr7g088700 1.0kb downstream 1.0kb downstream 12442 true chr7: 34579098-34591539 Medicago truncatula
Medtr7g088700 1.0kb downstream 1.0kb downstream 1000 false chr7: 34579098-34580097 Medicago truncatula
Medtr7g088700 2.0kb upstream 2.0kb upstream 13442 true chr7: 34580098-34593539 Medicago truncatula
Medtr7g088700 2.0kb upstream 2.0kb upstream 2000 false chr7: 34591540-34593539 Medicago truncatula
Medtr7g088700 2.0kb downstream 2.0kb downstream 13442 true chr7: 34578098-34591539 Medicago truncatula
Medtr7g088700 2.0kb downstream 2.0kb downstream 2000 false chr7: 34578098-34580097 Medicago truncatula
Medtr7g088700 5.0kb upstream 5.0kb upstream 16442 true chr7: 34580098-34596539 Medicago truncatula
Medtr7g088700 5.0kb upstream 5.0kb upstream 5000 false chr7: 34591540-34596539 Medicago truncatula
Medtr7g088700 5.0kb downstream 5.0kb downstream 16442 true chr7: 34575098-34591539 Medicago truncatula
Medtr7g088700 5.0kb downstream 5.0kb downstream 5000 false chr7: 34575098-34580097 Medicago truncatula
Medtr7g088700 10.0kb upstream 10.0kb upstream 21442 true chr7: 34580098-34601539 Medicago truncatula
Medtr7g088700 10.0kb upstream 10.0kb upstream 10000 false chr7: 34591540-34601539 Medicago truncatula
Medtr7g088700 10.0kb downstream 10.0kb downstream 21442 true chr7: 34570098-34591539 Medicago truncatula
Medtr7g088700 10.0kb downstream 10.0kb downstream 10000 false chr7: 34570098-34580097 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307042 5265 Fabidae View MSA
124072790 5270 Rosid View MSA
123737056 5271 Pentapetalae View MSA
122788563 5272 Eudicot View MSA
122044627 5273 Angiosperm View MSA
121347900 5274 Embryophyte View MSA
123426736 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.968     High  
cufflinks 12.662     High  
cufflinks 14.34     High  
cufflinks 3.343       Low
cufflinks 13.641     High  
cufflinks 3.569       Low
cufflinks 8.748        
cufflinks 11.933     High  
cufflinks 6.879        

0 Strain