Gene : Medtr7g089140 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR15141:SF40 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED Description:  transcription elongation factor (TFIIS) family protein
Genomic Order:  4187 Name:  ? Medtr7g089140
Secondary Identifier:  ? PAC:31081019
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g089140 0.5kb upstream 0.5kb upstream 4615 true chr7: 34858668-34863282 Medicago truncatula
Medtr7g089140 0.5kb upstream 0.5kb upstream 500 false chr7: 34862783-34863282 Medicago truncatula
Medtr7g089140 0.5kb downstream 0.5kb downstream 4615 true chr7: 34858168-34862782 Medicago truncatula
Medtr7g089140 0.5kb downstream 0.5kb downstream 500 false chr7: 34858168-34858667 Medicago truncatula
Medtr7g089140 1.0kb upstream 1.0kb upstream 5115 true chr7: 34858668-34863782 Medicago truncatula
Medtr7g089140 1.0kb upstream 1.0kb upstream 1000 false chr7: 34862783-34863782 Medicago truncatula
Medtr7g089140 1.0kb downstream 1.0kb downstream 5115 true chr7: 34857668-34862782 Medicago truncatula
Medtr7g089140 1.0kb downstream 1.0kb downstream 1000 false chr7: 34857668-34858667 Medicago truncatula
Medtr7g089140 2.0kb upstream 2.0kb upstream 6115 true chr7: 34858668-34864782 Medicago truncatula
Medtr7g089140 2.0kb upstream 2.0kb upstream 2000 false chr7: 34862783-34864782 Medicago truncatula
Medtr7g089140 2.0kb downstream 2.0kb downstream 6115 true chr7: 34856668-34862782 Medicago truncatula
Medtr7g089140 2.0kb downstream 2.0kb downstream 2000 false chr7: 34856668-34858667 Medicago truncatula
Medtr7g089140 5.0kb upstream 5.0kb upstream 9115 true chr7: 34858668-34867782 Medicago truncatula
Medtr7g089140 5.0kb upstream 5.0kb upstream 5000 false chr7: 34862783-34867782 Medicago truncatula
Medtr7g089140 5.0kb downstream 5.0kb downstream 9115 true chr7: 34853668-34862782 Medicago truncatula
Medtr7g089140 5.0kb downstream 5.0kb downstream 5000 false chr7: 34853668-34858667 Medicago truncatula
Medtr7g089140 10.0kb upstream 10.0kb upstream 14115 true chr7: 34858668-34872782 Medicago truncatula
Medtr7g089140 10.0kb upstream 10.0kb upstream 10000 false chr7: 34862783-34872782 Medicago truncatula
Medtr7g089140 10.0kb downstream 10.0kb downstream 14115 true chr7: 34848668-34862782 Medicago truncatula
Medtr7g089140 10.0kb downstream 10.0kb downstream 10000 false chr7: 34848668-34858667 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299503 5265 Fabidae View MSA
124062245 5270 Rosid View MSA
123747167 5271 Pentapetalae View MSA
122796041 5272 Eudicot View MSA
122045393 5273 Angiosperm View MSA
121348214 5274 Embryophyte View MSA
123380774 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.777       High
cufflinks 1.412        
cufflinks 2.081        
cufflinks 0.962       Low
cufflinks 1.527        
cufflinks 1.211        
cufflinks 3.38       High
cufflinks 1.705        
cufflinks 2.86        

0 Strain