Gene : Medtr7g090410 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13935:SF41 - ACHAETE-SCUTE HOMOLOG 3 Description:  transcription factor, putative
Genomic Order:  4286 Name:  ? Medtr7g090410
Secondary Identifier:  ? PAC:31081338
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g090410 0.5kb upstream 0.5kb upstream 2647 true chr7: 35562464-35565110 Medicago truncatula
Medtr7g090410 0.5kb upstream 0.5kb upstream 500 false chr7: 35562464-35562963 Medicago truncatula
Medtr7g090410 0.5kb downstream 0.5kb downstream 2647 true chr7: 35562964-35565610 Medicago truncatula
Medtr7g090410 0.5kb downstream 0.5kb downstream 500 false chr7: 35565111-35565610 Medicago truncatula
Medtr7g090410 1.0kb upstream 1.0kb upstream 3147 true chr7: 35561964-35565110 Medicago truncatula
Medtr7g090410 1.0kb upstream 1.0kb upstream 1000 false chr7: 35561964-35562963 Medicago truncatula
Medtr7g090410 1.0kb downstream 1.0kb downstream 3147 true chr7: 35562964-35566110 Medicago truncatula
Medtr7g090410 1.0kb downstream 1.0kb downstream 1000 false chr7: 35565111-35566110 Medicago truncatula
Medtr7g090410 2.0kb upstream 2.0kb upstream 4147 true chr7: 35560964-35565110 Medicago truncatula
Medtr7g090410 2.0kb upstream 2.0kb upstream 2000 false chr7: 35560964-35562963 Medicago truncatula
Medtr7g090410 2.0kb downstream 2.0kb downstream 4147 true chr7: 35562964-35567110 Medicago truncatula
Medtr7g090410 2.0kb downstream 2.0kb downstream 2000 false chr7: 35565111-35567110 Medicago truncatula
Medtr7g090410 5.0kb upstream 5.0kb upstream 7147 true chr7: 35557964-35565110 Medicago truncatula
Medtr7g090410 5.0kb upstream 5.0kb upstream 5000 false chr7: 35557964-35562963 Medicago truncatula
Medtr7g090410 5.0kb downstream 5.0kb downstream 7147 true chr7: 35562964-35570110 Medicago truncatula
Medtr7g090410 5.0kb downstream 5.0kb downstream 5000 false chr7: 35565111-35570110 Medicago truncatula
Medtr7g090410 10.0kb upstream 10.0kb upstream 12147 true chr7: 35552964-35565110 Medicago truncatula
Medtr7g090410 10.0kb upstream 10.0kb upstream 10000 false chr7: 35552964-35562963 Medicago truncatula
Medtr7g090410 10.0kb downstream 10.0kb downstream 12147 true chr7: 35562964-35575110 Medicago truncatula
Medtr7g090410 10.0kb downstream 10.0kb downstream 10000 false chr7: 35565111-35575110 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311089 5265 Fabidae View MSA
124071325 5270 Rosid View MSA
123751421 5271 Pentapetalae View MSA
122790904 5272 Eudicot View MSA
122049440 5273 Angiosperm View MSA
121311403 5274 Embryophyte View MSA
123348704 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low  
cufflinks 0.006     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.487        
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.577        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.563       High

0 Strain