Gene : Medtr7g090210 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13247 - TETRATRICOPEPTIDE REPEAT PROTEIN 11 TPR REPEAT PROTEIN 11 Description:  fission 1 protein
Genomic Order:  4266 Name:  ? Medtr7g090210
Secondary Identifier:  ? PAC:31078349
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g090210 0.5kb upstream 0.5kb upstream 3936 true chr7: 35407299-35411234 Medicago truncatula
Medtr7g090210 0.5kb upstream 0.5kb upstream 500 false chr7: 35407299-35407798 Medicago truncatula
Medtr7g090210 0.5kb downstream 0.5kb downstream 3936 true chr7: 35407799-35411734 Medicago truncatula
Medtr7g090210 0.5kb downstream 0.5kb downstream 500 false chr7: 35411235-35411734 Medicago truncatula
Medtr7g090210 1.0kb upstream 1.0kb upstream 4436 true chr7: 35406799-35411234 Medicago truncatula
Medtr7g090210 1.0kb upstream 1.0kb upstream 1000 false chr7: 35406799-35407798 Medicago truncatula
Medtr7g090210 1.0kb downstream 1.0kb downstream 4436 true chr7: 35407799-35412234 Medicago truncatula
Medtr7g090210 1.0kb downstream 1.0kb downstream 1000 false chr7: 35411235-35412234 Medicago truncatula
Medtr7g090210 2.0kb upstream 2.0kb upstream 5436 true chr7: 35405799-35411234 Medicago truncatula
Medtr7g090210 2.0kb upstream 2.0kb upstream 2000 false chr7: 35405799-35407798 Medicago truncatula
Medtr7g090210 2.0kb downstream 2.0kb downstream 5436 true chr7: 35407799-35413234 Medicago truncatula
Medtr7g090210 2.0kb downstream 2.0kb downstream 2000 false chr7: 35411235-35413234 Medicago truncatula
Medtr7g090210 5.0kb upstream 5.0kb upstream 8436 true chr7: 35402799-35411234 Medicago truncatula
Medtr7g090210 5.0kb upstream 5.0kb upstream 5000 false chr7: 35402799-35407798 Medicago truncatula
Medtr7g090210 5.0kb downstream 5.0kb downstream 8436 true chr7: 35407799-35416234 Medicago truncatula
Medtr7g090210 5.0kb downstream 5.0kb downstream 5000 false chr7: 35411235-35416234 Medicago truncatula
Medtr7g090210 10.0kb upstream 10.0kb upstream 13436 true chr7: 35397799-35411234 Medicago truncatula
Medtr7g090210 10.0kb upstream 10.0kb upstream 10000 false chr7: 35397799-35407798 Medicago truncatula
Medtr7g090210 10.0kb downstream 10.0kb downstream 13436 true chr7: 35407799-35421234 Medicago truncatula
Medtr7g090210 10.0kb downstream 10.0kb downstream 10000 false chr7: 35411235-35421234 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301583 5265 Fabidae View MSA
124071938 5270 Rosid View MSA
123743204 5271 Pentapetalae View MSA
122793095 5272 Eudicot View MSA
122046203 5273 Angiosperm View MSA
123429111 5275 Viridiplantae View MSA
121347777 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.019       High
cufflinks 0.999       Low
cufflinks 1.513        
cufflinks 2.083       High
cufflinks 1.245        
cufflinks 0.841       Low
cufflinks 1.565        
cufflinks 1.186        
cufflinks 1.711        

0 Strain