Gene : Medtr7g084670 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR23240:SF6 - DNA CROSS-LINK REPAIR 1A PROTEIN Description:  DNA cross-link repair protein
Genomic Order:  3879 Name:  ? Medtr7g084670
Secondary Identifier:  ? PAC:31082197
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g084670 0.5kb upstream 0.5kb upstream 4330 true chr7: 32665494-32669823 Medicago truncatula
Medtr7g084670 0.5kb upstream 0.5kb upstream 500 false chr7: 32669324-32669823 Medicago truncatula
Medtr7g084670 0.5kb downstream 0.5kb downstream 4330 true chr7: 32664994-32669323 Medicago truncatula
Medtr7g084670 0.5kb downstream 0.5kb downstream 500 false chr7: 32664994-32665493 Medicago truncatula
Medtr7g084670 1.0kb upstream 1.0kb upstream 4830 true chr7: 32665494-32670323 Medicago truncatula
Medtr7g084670 1.0kb upstream 1.0kb upstream 1000 false chr7: 32669324-32670323 Medicago truncatula
Medtr7g084670 1.0kb downstream 1.0kb downstream 4830 true chr7: 32664494-32669323 Medicago truncatula
Medtr7g084670 1.0kb downstream 1.0kb downstream 1000 false chr7: 32664494-32665493 Medicago truncatula
Medtr7g084670 2.0kb upstream 2.0kb upstream 5830 true chr7: 32665494-32671323 Medicago truncatula
Medtr7g084670 2.0kb upstream 2.0kb upstream 2000 false chr7: 32669324-32671323 Medicago truncatula
Medtr7g084670 2.0kb downstream 2.0kb downstream 5830 true chr7: 32663494-32669323 Medicago truncatula
Medtr7g084670 2.0kb downstream 2.0kb downstream 2000 false chr7: 32663494-32665493 Medicago truncatula
Medtr7g084670 5.0kb upstream 5.0kb upstream 8830 true chr7: 32665494-32674323 Medicago truncatula
Medtr7g084670 5.0kb upstream 5.0kb upstream 5000 false chr7: 32669324-32674323 Medicago truncatula
Medtr7g084670 5.0kb downstream 5.0kb downstream 8830 true chr7: 32660494-32669323 Medicago truncatula
Medtr7g084670 5.0kb downstream 5.0kb downstream 5000 false chr7: 32660494-32665493 Medicago truncatula
Medtr7g084670 10.0kb upstream 10.0kb upstream 13830 true chr7: 32665494-32679323 Medicago truncatula
Medtr7g084670 10.0kb upstream 10.0kb upstream 10000 false chr7: 32669324-32679323 Medicago truncatula
Medtr7g084670 10.0kb downstream 10.0kb downstream 13830 true chr7: 32655494-32669323 Medicago truncatula
Medtr7g084670 10.0kb downstream 10.0kb downstream 10000 false chr7: 32655494-32665493 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296613 5265 Fabidae View MSA
124073622 5270 Rosid View MSA
123741645 5271 Pentapetalae View MSA
122793173 5272 Eudicot View MSA
122046861 5273 Angiosperm View MSA
121351448 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.198        
cufflinks 0.369        
cufflinks 0.179       Low
cufflinks 0.493        
cufflinks 0.182       Low
cufflinks 0.483        
cufflinks 0.531        
cufflinks 0.19        
cufflinks 0.615       High

0 Strain