Gene : Medtr7g084400 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR24089:SF294 - CALCIUM-BINDING TRANSPORTER-LIKE PROTEIN Description:  substrate carrier family protein
Genomic Order:  3868 Name:  ? Medtr7g084400
Secondary Identifier:  ? PAC:31079189
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g084400 0.5kb upstream 0.5kb upstream 4349 true chr7: 32580284-32584632 Medicago truncatula
Medtr7g084400 0.5kb upstream 0.5kb upstream 500 false chr7: 32584133-32584632 Medicago truncatula
Medtr7g084400 0.5kb downstream 0.5kb downstream 4349 true chr7: 32579784-32584132 Medicago truncatula
Medtr7g084400 0.5kb downstream 0.5kb downstream 500 false chr7: 32579784-32580283 Medicago truncatula
Medtr7g084400 1.0kb upstream 1.0kb upstream 4849 true chr7: 32580284-32585132 Medicago truncatula
Medtr7g084400 1.0kb upstream 1.0kb upstream 1000 false chr7: 32584133-32585132 Medicago truncatula
Medtr7g084400 1.0kb downstream 1.0kb downstream 4849 true chr7: 32579284-32584132 Medicago truncatula
Medtr7g084400 1.0kb downstream 1.0kb downstream 1000 false chr7: 32579284-32580283 Medicago truncatula
Medtr7g084400 2.0kb upstream 2.0kb upstream 5849 true chr7: 32580284-32586132 Medicago truncatula
Medtr7g084400 2.0kb upstream 2.0kb upstream 2000 false chr7: 32584133-32586132 Medicago truncatula
Medtr7g084400 2.0kb downstream 2.0kb downstream 5849 true chr7: 32578284-32584132 Medicago truncatula
Medtr7g084400 2.0kb downstream 2.0kb downstream 2000 false chr7: 32578284-32580283 Medicago truncatula
Medtr7g084400 5.0kb upstream 5.0kb upstream 8849 true chr7: 32580284-32589132 Medicago truncatula
Medtr7g084400 5.0kb upstream 5.0kb upstream 5000 false chr7: 32584133-32589132 Medicago truncatula
Medtr7g084400 5.0kb downstream 5.0kb downstream 8849 true chr7: 32575284-32584132 Medicago truncatula
Medtr7g084400 5.0kb downstream 5.0kb downstream 5000 false chr7: 32575284-32580283 Medicago truncatula
Medtr7g084400 10.0kb upstream 10.0kb upstream 13849 true chr7: 32580284-32594132 Medicago truncatula
Medtr7g084400 10.0kb upstream 10.0kb upstream 10000 false chr7: 32584133-32594132 Medicago truncatula
Medtr7g084400 10.0kb downstream 10.0kb downstream 13849 true chr7: 32570284-32584132 Medicago truncatula
Medtr7g084400 10.0kb downstream 10.0kb downstream 10000 false chr7: 32570284-32580283 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304535 5265 Fabidae View MSA
124072289 5270 Rosid View MSA
123740149 5271 Pentapetalae View MSA
122790227 5272 Eudicot View MSA
122042034 5273 Angiosperm View MSA
123429077 5275 Viridiplantae View MSA
121349229 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.263        
cufflinks 2.164        
cufflinks 1.695        
cufflinks 0.527       Low
cufflinks 2.029        
cufflinks 0.367       Low
cufflinks 1.305        
cufflinks 1.518        
cufflinks 1.507        

0 Strain