Gene : Medtr7g085540 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11909:SF131 - CASEIN KINASE-LIKE PROTEIN-RELATED Description:  casein kinase I-like protein
Genomic Order:  3947 Name:  ? Medtr7g085540
Secondary Identifier:  ? PAC:31083344
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g085540 0.5kb upstream 0.5kb upstream 7178 true chr7: 33143708-33150885 Medicago truncatula
Medtr7g085540 0.5kb upstream 0.5kb upstream 500 false chr7: 33143708-33144207 Medicago truncatula
Medtr7g085540 0.5kb downstream 0.5kb downstream 7178 true chr7: 33144208-33151385 Medicago truncatula
Medtr7g085540 0.5kb downstream 0.5kb downstream 500 false chr7: 33150886-33151385 Medicago truncatula
Medtr7g085540 1.0kb upstream 1.0kb upstream 7678 true chr7: 33143208-33150885 Medicago truncatula
Medtr7g085540 1.0kb upstream 1.0kb upstream 1000 false chr7: 33143208-33144207 Medicago truncatula
Medtr7g085540 1.0kb downstream 1.0kb downstream 7678 true chr7: 33144208-33151885 Medicago truncatula
Medtr7g085540 1.0kb downstream 1.0kb downstream 1000 false chr7: 33150886-33151885 Medicago truncatula
Medtr7g085540 2.0kb upstream 2.0kb upstream 8678 true chr7: 33142208-33150885 Medicago truncatula
Medtr7g085540 2.0kb upstream 2.0kb upstream 2000 false chr7: 33142208-33144207 Medicago truncatula
Medtr7g085540 2.0kb downstream 2.0kb downstream 8678 true chr7: 33144208-33152885 Medicago truncatula
Medtr7g085540 2.0kb downstream 2.0kb downstream 2000 false chr7: 33150886-33152885 Medicago truncatula
Medtr7g085540 5.0kb upstream 5.0kb upstream 11678 true chr7: 33139208-33150885 Medicago truncatula
Medtr7g085540 5.0kb upstream 5.0kb upstream 5000 false chr7: 33139208-33144207 Medicago truncatula
Medtr7g085540 5.0kb downstream 5.0kb downstream 11678 true chr7: 33144208-33155885 Medicago truncatula
Medtr7g085540 5.0kb downstream 5.0kb downstream 5000 false chr7: 33150886-33155885 Medicago truncatula
Medtr7g085540 10.0kb upstream 10.0kb upstream 16678 true chr7: 33134208-33150885 Medicago truncatula
Medtr7g085540 10.0kb upstream 10.0kb upstream 10000 false chr7: 33134208-33144207 Medicago truncatula
Medtr7g085540 10.0kb downstream 10.0kb downstream 16678 true chr7: 33144208-33160885 Medicago truncatula
Medtr7g085540 10.0kb downstream 10.0kb downstream 10000 false chr7: 33150886-33160885 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041344 5273 Angiosperm View MSA
122308851 5265 Fabidae View MSA
124066133 5270 Rosid View MSA
123749294 5271 Pentapetalae View MSA
122796598 5272 Eudicot View MSA
121309833 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.135        
cufflinks 15.47     High  
cufflinks 15.037     High  
cufflinks 5.149        
cufflinks 15.693     High  
cufflinks 1.707       Low
cufflinks 6.516        
cufflinks 10.657     High  
cufflinks 10.784     High  

0 Strain