Gene : Medtr7g086500 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR24411:SF35 - BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-RELATED Description:  BTB/POZ/MATH-domain protein
Genomic Order:  4016 Name:  ? Medtr7g086500
Secondary Identifier:  ? PAC:31078431
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g086500 0.5kb upstream 0.5kb upstream 8912 true chr7: 33577975-33586886 Medicago truncatula
Medtr7g086500 0.5kb upstream 0.5kb upstream 500 false chr7: 33577975-33578474 Medicago truncatula
Medtr7g086500 0.5kb downstream 0.5kb downstream 8912 true chr7: 33578475-33587386 Medicago truncatula
Medtr7g086500 0.5kb downstream 0.5kb downstream 500 false chr7: 33586887-33587386 Medicago truncatula
Medtr7g086500 1.0kb upstream 1.0kb upstream 9412 true chr7: 33577475-33586886 Medicago truncatula
Medtr7g086500 1.0kb upstream 1.0kb upstream 1000 false chr7: 33577475-33578474 Medicago truncatula
Medtr7g086500 1.0kb downstream 1.0kb downstream 9412 true chr7: 33578475-33587886 Medicago truncatula
Medtr7g086500 1.0kb downstream 1.0kb downstream 1000 false chr7: 33586887-33587886 Medicago truncatula
Medtr7g086500 2.0kb upstream 2.0kb upstream 10412 true chr7: 33576475-33586886 Medicago truncatula
Medtr7g086500 2.0kb upstream 2.0kb upstream 2000 false chr7: 33576475-33578474 Medicago truncatula
Medtr7g086500 2.0kb downstream 2.0kb downstream 10412 true chr7: 33578475-33588886 Medicago truncatula
Medtr7g086500 2.0kb downstream 2.0kb downstream 2000 false chr7: 33586887-33588886 Medicago truncatula
Medtr7g086500 5.0kb upstream 5.0kb upstream 13412 true chr7: 33573475-33586886 Medicago truncatula
Medtr7g086500 5.0kb upstream 5.0kb upstream 5000 false chr7: 33573475-33578474 Medicago truncatula
Medtr7g086500 5.0kb downstream 5.0kb downstream 13412 true chr7: 33578475-33591886 Medicago truncatula
Medtr7g086500 5.0kb downstream 5.0kb downstream 5000 false chr7: 33586887-33591886 Medicago truncatula
Medtr7g086500 10.0kb upstream 10.0kb upstream 18412 true chr7: 33568475-33586886 Medicago truncatula
Medtr7g086500 10.0kb upstream 10.0kb upstream 10000 false chr7: 33568475-33578474 Medicago truncatula
Medtr7g086500 10.0kb downstream 10.0kb downstream 18412 true chr7: 33578475-33596886 Medicago truncatula
Medtr7g086500 10.0kb downstream 10.0kb downstream 10000 false chr7: 33586887-33596886 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041251 5273 Angiosperm View MSA
122307316 5265 Fabidae View MSA
124061279 5270 Rosid View MSA
123740523 5271 Pentapetalae View MSA
122790059 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.539       High
cufflinks 1.938        
cufflinks 2.081        
cufflinks 2.205        
cufflinks 2.286        
cufflinks 1.017       Low
cufflinks 2.808        
cufflinks 1.843        
cufflinks 2.933        

0 Strain