Gene : Medtr7g087110 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10314:SF90 - S-SULFOCYSTEINE SYNTHASE, CHLOROPLASTIC-RELATED Description:  O-acetylserine (thiol) lyase
Genomic Order:  4060 Name:  ? Medtr7g087110
Secondary Identifier:  ? PAC:31080570
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CYSTSYN-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6936 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g087110 0.5kb upstream 0.5kb upstream 5868 true chr7: 33906426-33912293 Medicago truncatula
Medtr7g087110 0.5kb upstream 0.5kb upstream 500 false chr7: 33906426-33906925 Medicago truncatula
Medtr7g087110 0.5kb downstream 0.5kb downstream 5868 true chr7: 33906926-33912793 Medicago truncatula
Medtr7g087110 0.5kb downstream 0.5kb downstream 500 false chr7: 33912294-33912793 Medicago truncatula
Medtr7g087110 1.0kb upstream 1.0kb upstream 6368 true chr7: 33905926-33912293 Medicago truncatula
Medtr7g087110 1.0kb upstream 1.0kb upstream 1000 false chr7: 33905926-33906925 Medicago truncatula
Medtr7g087110 1.0kb downstream 1.0kb downstream 6368 true chr7: 33906926-33913293 Medicago truncatula
Medtr7g087110 1.0kb downstream 1.0kb downstream 1000 false chr7: 33912294-33913293 Medicago truncatula
Medtr7g087110 2.0kb upstream 2.0kb upstream 7368 true chr7: 33904926-33912293 Medicago truncatula
Medtr7g087110 2.0kb upstream 2.0kb upstream 2000 false chr7: 33904926-33906925 Medicago truncatula
Medtr7g087110 2.0kb downstream 2.0kb downstream 7368 true chr7: 33906926-33914293 Medicago truncatula
Medtr7g087110 2.0kb downstream 2.0kb downstream 2000 false chr7: 33912294-33914293 Medicago truncatula
Medtr7g087110 5.0kb upstream 5.0kb upstream 10368 true chr7: 33901926-33912293 Medicago truncatula
Medtr7g087110 5.0kb upstream 5.0kb upstream 5000 false chr7: 33901926-33906925 Medicago truncatula
Medtr7g087110 5.0kb downstream 5.0kb downstream 10368 true chr7: 33906926-33917293 Medicago truncatula
Medtr7g087110 5.0kb downstream 5.0kb downstream 5000 false chr7: 33912294-33917293 Medicago truncatula
Medtr7g087110 10.0kb upstream 10.0kb upstream 15368 true chr7: 33896926-33912293 Medicago truncatula
Medtr7g087110 10.0kb upstream 10.0kb upstream 10000 false chr7: 33896926-33906925 Medicago truncatula
Medtr7g087110 10.0kb downstream 10.0kb downstream 15368 true chr7: 33906926-33922293 Medicago truncatula
Medtr7g087110 10.0kb downstream 10.0kb downstream 10000 false chr7: 33912294-33922293 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302417 5265 Fabidae View MSA
124067965 5270 Rosid View MSA
123741617 5271 Pentapetalae View MSA
122788921 5272 Eudicot View MSA
122042312 5273 Angiosperm View MSA
121350970 5274 Embryophyte View MSA
123424805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.152        
cufflinks 2.265        
cufflinks 4.743       High
cufflinks 0.099        
cufflinks 7.572       High
cufflinks 0.023     Low Low
cufflinks 0.212        
cufflinks 4.365        
cufflinks 0.314        

0 Strain