Gene : Medtr7g077810 M. truncatula Mt4.0v1
Defline:  (1 of 10) PTHR11165//PTHR11165:SF61 - SKP1 Description:  ubiquitin-protein ligase, putative
Genomic Order:  3393 Name:  ? Medtr7g077810
Secondary Identifier:  ? PAC:31082899
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g077810 0.5kb upstream 0.5kb upstream 5849 true chr7: 29384437-29390285 Medicago truncatula
Medtr7g077810 0.5kb upstream 0.5kb upstream 500 false chr7: 29389786-29390285 Medicago truncatula
Medtr7g077810 0.5kb downstream 0.5kb downstream 5849 true chr7: 29383937-29389785 Medicago truncatula
Medtr7g077810 0.5kb downstream 0.5kb downstream 500 false chr7: 29383937-29384436 Medicago truncatula
Medtr7g077810 1.0kb upstream 1.0kb upstream 6349 true chr7: 29384437-29390785 Medicago truncatula
Medtr7g077810 1.0kb upstream 1.0kb upstream 1000 false chr7: 29389786-29390785 Medicago truncatula
Medtr7g077810 1.0kb downstream 1.0kb downstream 6349 true chr7: 29383437-29389785 Medicago truncatula
Medtr7g077810 1.0kb downstream 1.0kb downstream 1000 false chr7: 29383437-29384436 Medicago truncatula
Medtr7g077810 2.0kb upstream 2.0kb upstream 7349 true chr7: 29384437-29391785 Medicago truncatula
Medtr7g077810 2.0kb upstream 2.0kb upstream 2000 false chr7: 29389786-29391785 Medicago truncatula
Medtr7g077810 2.0kb downstream 2.0kb downstream 7349 true chr7: 29382437-29389785 Medicago truncatula
Medtr7g077810 2.0kb downstream 2.0kb downstream 2000 false chr7: 29382437-29384436 Medicago truncatula
Medtr7g077810 5.0kb upstream 5.0kb upstream 10349 true chr7: 29384437-29394785 Medicago truncatula
Medtr7g077810 5.0kb upstream 5.0kb upstream 5000 false chr7: 29389786-29394785 Medicago truncatula
Medtr7g077810 5.0kb downstream 5.0kb downstream 10349 true chr7: 29379437-29389785 Medicago truncatula
Medtr7g077810 5.0kb downstream 5.0kb downstream 5000 false chr7: 29379437-29384436 Medicago truncatula
Medtr7g077810 10.0kb upstream 10.0kb upstream 15349 true chr7: 29384437-29399785 Medicago truncatula
Medtr7g077810 10.0kb upstream 10.0kb upstream 10000 false chr7: 29389786-29399785 Medicago truncatula
Medtr7g077810 10.0kb downstream 10.0kb downstream 15349 true chr7: 29374437-29389785 Medicago truncatula
Medtr7g077810 10.0kb downstream 10.0kb downstream 10000 false chr7: 29374437-29384436 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041112 5273 Angiosperm View MSA
122312813 5265 Fabidae View MSA
124072135 5270 Rosid View MSA
123751098 5271 Pentapetalae View MSA
122789409 5272 Eudicot View MSA
121347198 5274 Embryophyte View MSA
123426227 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.408        
cufflinks 1.505        
cufflinks 1.801        
cufflinks 0.421        
cufflinks 2.128        
cufflinks 0.146       Low
cufflinks 1.202        
cufflinks 1.682        
cufflinks 0.744        

0 Strain