Gene : Medtr7g081200 M. truncatula Mt4.0v1
Defline:  (1 of 5) KOG0884 - Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase Description:  peptidyl-prolyl cis-trans isomerase
Genomic Order:  3642 Name:  ? Medtr7g081200
Secondary Identifier:  ? PAC:31082474
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g081200 0.5kb upstream 0.5kb upstream 5086 true chr7: 30967214-30972299 Medicago truncatula
Medtr7g081200 0.5kb upstream 0.5kb upstream 500 false chr7: 30971800-30972299 Medicago truncatula
Medtr7g081200 0.5kb downstream 0.5kb downstream 5086 true chr7: 30966714-30971799 Medicago truncatula
Medtr7g081200 0.5kb downstream 0.5kb downstream 500 false chr7: 30966714-30967213 Medicago truncatula
Medtr7g081200 1.0kb upstream 1.0kb upstream 5586 true chr7: 30967214-30972799 Medicago truncatula
Medtr7g081200 1.0kb upstream 1.0kb upstream 1000 false chr7: 30971800-30972799 Medicago truncatula
Medtr7g081200 1.0kb downstream 1.0kb downstream 5586 true chr7: 30966214-30971799 Medicago truncatula
Medtr7g081200 1.0kb downstream 1.0kb downstream 1000 false chr7: 30966214-30967213 Medicago truncatula
Medtr7g081200 2.0kb upstream 2.0kb upstream 6586 true chr7: 30967214-30973799 Medicago truncatula
Medtr7g081200 2.0kb upstream 2.0kb upstream 2000 false chr7: 30971800-30973799 Medicago truncatula
Medtr7g081200 2.0kb downstream 2.0kb downstream 6586 true chr7: 30965214-30971799 Medicago truncatula
Medtr7g081200 2.0kb downstream 2.0kb downstream 2000 false chr7: 30965214-30967213 Medicago truncatula
Medtr7g081200 5.0kb upstream 5.0kb upstream 9586 true chr7: 30967214-30976799 Medicago truncatula
Medtr7g081200 5.0kb upstream 5.0kb upstream 5000 false chr7: 30971800-30976799 Medicago truncatula
Medtr7g081200 5.0kb downstream 5.0kb downstream 9586 true chr7: 30962214-30971799 Medicago truncatula
Medtr7g081200 5.0kb downstream 5.0kb downstream 5000 false chr7: 30962214-30967213 Medicago truncatula
Medtr7g081200 10.0kb upstream 10.0kb upstream 14586 true chr7: 30967214-30981799 Medicago truncatula
Medtr7g081200 10.0kb upstream 10.0kb upstream 10000 false chr7: 30971800-30981799 Medicago truncatula
Medtr7g081200 10.0kb downstream 10.0kb downstream 14586 true chr7: 30957214-30971799 Medicago truncatula
Medtr7g081200 10.0kb downstream 10.0kb downstream 10000 false chr7: 30957214-30967213 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308221 5265 Fabidae View MSA
124071456 5270 Rosid View MSA
123751062 5271 Pentapetalae View MSA
122773901 5272 Eudicot View MSA
122043023 5273 Angiosperm View MSA
121350933 5274 Embryophyte View MSA
123428077 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.666       High
cufflinks 0.042     Low  
cufflinks 0.008     Low Low
cufflinks 0.01     Low Low
cufflinks 0.04     Low  
cufflinks 0.053     Low  
cufflinks 0.087        
cufflinks 0.027     Low  
cufflinks 0.103        

0 Strain