Gene : Medtr6g093060 M. truncatula Mt4.0v1
Defline:  (1 of 1) PF04192 - Utp21 specific WD40 associated putative domain (Utp21) Description:  transducin/WD40 repeat protein
Genomic Order:  3860 Name:  ? Medtr6g093060
Secondary Identifier:  ? PAC:31103516
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g093060 0.5kb upstream 0.5kb upstream 10497 true chr6: 35097337-35107833 Medicago truncatula
Medtr6g093060 0.5kb upstream 0.5kb upstream 500 false chr6: 35097337-35097836 Medicago truncatula
Medtr6g093060 0.5kb downstream 0.5kb downstream 10497 true chr6: 35097837-35108333 Medicago truncatula
Medtr6g093060 0.5kb downstream 0.5kb downstream 500 false chr6: 35107834-35108333 Medicago truncatula
Medtr6g093060 1.0kb upstream 1.0kb upstream 10997 true chr6: 35096837-35107833 Medicago truncatula
Medtr6g093060 1.0kb upstream 1.0kb upstream 1000 false chr6: 35096837-35097836 Medicago truncatula
Medtr6g093060 1.0kb downstream 1.0kb downstream 10997 true chr6: 35097837-35108833 Medicago truncatula
Medtr6g093060 1.0kb downstream 1.0kb downstream 1000 false chr6: 35107834-35108833 Medicago truncatula
Medtr6g093060 2.0kb upstream 2.0kb upstream 11997 true chr6: 35095837-35107833 Medicago truncatula
Medtr6g093060 2.0kb upstream 2.0kb upstream 2000 false chr6: 35095837-35097836 Medicago truncatula
Medtr6g093060 2.0kb downstream 2.0kb downstream 11997 true chr6: 35097837-35109833 Medicago truncatula
Medtr6g093060 2.0kb downstream 2.0kb downstream 2000 false chr6: 35107834-35109833 Medicago truncatula
Medtr6g093060 5.0kb upstream 5.0kb upstream 14997 true chr6: 35092837-35107833 Medicago truncatula
Medtr6g093060 5.0kb upstream 5.0kb upstream 5000 false chr6: 35092837-35097836 Medicago truncatula
Medtr6g093060 5.0kb downstream 5.0kb downstream 14997 true chr6: 35097837-35112833 Medicago truncatula
Medtr6g093060 5.0kb downstream 5.0kb downstream 5000 false chr6: 35107834-35112833 Medicago truncatula
Medtr6g093060 10.0kb upstream 10.0kb upstream 19997 true chr6: 35087837-35107833 Medicago truncatula
Medtr6g093060 10.0kb upstream 10.0kb upstream 10000 false chr6: 35087837-35097836 Medicago truncatula
Medtr6g093060 10.0kb downstream 10.0kb downstream 19997 true chr6: 35097837-35117833 Medicago truncatula
Medtr6g093060 10.0kb downstream 10.0kb downstream 10000 false chr6: 35107834-35117833 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306953 5265 Fabidae View MSA
124065336 5270 Rosid View MSA
123738219 5271 Pentapetalae View MSA
122786158 5272 Eudicot View MSA
122041805 5273 Angiosperm View MSA
121346831 5274 Embryophyte View MSA
123424252 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.721        
cufflinks 2.179        
cufflinks 3.117        
cufflinks 1.255        
cufflinks 4.224       High
cufflinks 0.57       Low
cufflinks 1.585        
cufflinks 2.622        
cufflinks 1.455        

0 Strain