Gene : Medtr6g460470 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10264:SF69 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 4 Description:  SPFH/band 7/PHB domain membrane-associated family protein
Genomic Order:  2422 Name:  ? Medtr6g460470
Secondary Identifier:  ? PAC:31105484
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g460470 0.5kb upstream 0.5kb upstream 4953 true chr6: 20774875-20779827 Medicago truncatula
Medtr6g460470 0.5kb upstream 0.5kb upstream 500 false chr6: 20774875-20775374 Medicago truncatula
Medtr6g460470 0.5kb downstream 0.5kb downstream 4953 true chr6: 20775375-20780327 Medicago truncatula
Medtr6g460470 0.5kb downstream 0.5kb downstream 500 false chr6: 20779828-20780327 Medicago truncatula
Medtr6g460470 1.0kb upstream 1.0kb upstream 5453 true chr6: 20774375-20779827 Medicago truncatula
Medtr6g460470 1.0kb upstream 1.0kb upstream 1000 false chr6: 20774375-20775374 Medicago truncatula
Medtr6g460470 1.0kb downstream 1.0kb downstream 5453 true chr6: 20775375-20780827 Medicago truncatula
Medtr6g460470 1.0kb downstream 1.0kb downstream 1000 false chr6: 20779828-20780827 Medicago truncatula
Medtr6g460470 2.0kb upstream 2.0kb upstream 6453 true chr6: 20773375-20779827 Medicago truncatula
Medtr6g460470 2.0kb upstream 2.0kb upstream 2000 false chr6: 20773375-20775374 Medicago truncatula
Medtr6g460470 2.0kb downstream 2.0kb downstream 6453 true chr6: 20775375-20781827 Medicago truncatula
Medtr6g460470 2.0kb downstream 2.0kb downstream 2000 false chr6: 20779828-20781827 Medicago truncatula
Medtr6g460470 5.0kb upstream 5.0kb upstream 9453 true chr6: 20770375-20779827 Medicago truncatula
Medtr6g460470 5.0kb upstream 5.0kb upstream 5000 false chr6: 20770375-20775374 Medicago truncatula
Medtr6g460470 5.0kb downstream 5.0kb downstream 9453 true chr6: 20775375-20784827 Medicago truncatula
Medtr6g460470 5.0kb downstream 5.0kb downstream 5000 false chr6: 20779828-20784827 Medicago truncatula
Medtr6g460470 10.0kb upstream 10.0kb upstream 14453 true chr6: 20765375-20779827 Medicago truncatula
Medtr6g460470 10.0kb upstream 10.0kb upstream 10000 false chr6: 20765375-20775374 Medicago truncatula
Medtr6g460470 10.0kb downstream 10.0kb downstream 14453 true chr6: 20775375-20789827 Medicago truncatula
Medtr6g460470 10.0kb downstream 10.0kb downstream 10000 false chr6: 20779828-20789827 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305213 5265 Fabidae View MSA
124064454 5270 Rosid View MSA
123736797 5271 Pentapetalae View MSA
122786517 5272 Eudicot View MSA
122047098 5273 Angiosperm View MSA
121346579 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.125     High High
cufflinks 12.607     High  
cufflinks 12.873     High  
cufflinks 11.308     High  
cufflinks 14.848     High  
cufflinks 11.015     High  
cufflinks 25.217     High High
cufflinks 11.426     High  
cufflinks 13.42     High  

0 Strain