Gene : Medtr6g478190 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11527:SF171 - ALPHA-CRYSTALLIN DOMAIN OF HEAT SHOCK PROTEIN-CONTAINING PROTEIN Description:  hsp20/alpha crystallin family protein
Genomic Order:  3115 Name:  ? Medtr6g478190
Secondary Identifier:  ? PAC:31101429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr6g478190 0.5kb upstream 0.5kb upstream 2158 true chr6: 29068817-29070974 Medicago truncatula
Medtr6g478190 0.5kb upstream 0.5kb upstream 500 false chr6: 29070475-29070974 Medicago truncatula
Medtr6g478190 0.5kb downstream 0.5kb downstream 2158 true chr6: 29068317-29070474 Medicago truncatula
Medtr6g478190 0.5kb downstream 0.5kb downstream 500 false chr6: 29068317-29068816 Medicago truncatula
Medtr6g478190 1.0kb upstream 1.0kb upstream 2658 true chr6: 29068817-29071474 Medicago truncatula
Medtr6g478190 1.0kb upstream 1.0kb upstream 1000 false chr6: 29070475-29071474 Medicago truncatula
Medtr6g478190 1.0kb downstream 1.0kb downstream 2658 true chr6: 29067817-29070474 Medicago truncatula
Medtr6g478190 1.0kb downstream 1.0kb downstream 1000 false chr6: 29067817-29068816 Medicago truncatula
Medtr6g478190 2.0kb upstream 2.0kb upstream 3658 true chr6: 29068817-29072474 Medicago truncatula
Medtr6g478190 2.0kb upstream 2.0kb upstream 2000 false chr6: 29070475-29072474 Medicago truncatula
Medtr6g478190 2.0kb downstream 2.0kb downstream 3658 true chr6: 29066817-29070474 Medicago truncatula
Medtr6g478190 2.0kb downstream 2.0kb downstream 2000 false chr6: 29066817-29068816 Medicago truncatula
Medtr6g478190 5.0kb upstream 5.0kb upstream 6658 true chr6: 29068817-29075474 Medicago truncatula
Medtr6g478190 5.0kb upstream 5.0kb upstream 5000 false chr6: 29070475-29075474 Medicago truncatula
Medtr6g478190 5.0kb downstream 5.0kb downstream 6658 true chr6: 29063817-29070474 Medicago truncatula
Medtr6g478190 5.0kb downstream 5.0kb downstream 5000 false chr6: 29063817-29068816 Medicago truncatula
Medtr6g478190 10.0kb upstream 10.0kb upstream 11658 true chr6: 29068817-29080474 Medicago truncatula
Medtr6g478190 10.0kb upstream 10.0kb upstream 10000 false chr6: 29070475-29080474 Medicago truncatula
Medtr6g478190 10.0kb downstream 10.0kb downstream 11658 true chr6: 29058817-29070474 Medicago truncatula
Medtr6g478190 10.0kb downstream 10.0kb downstream 10000 false chr6: 29058817-29068816 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312216 5265 Fabidae View MSA
124069899 5270 Rosid View MSA
123751884 5271 Pentapetalae View MSA
122795343 5272 Eudicot View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.029     Low Low
cufflinks 0.536        
cufflinks 0.462        
cufflinks 0.684        
cufflinks 0.577        
cufflinks 0.502        
cufflinks 0.792        
cufflinks 0.472        
cufflinks 0.507        

0 Strain