Gene : Medtr7g039520 M. truncatula Mt4.0v1
Defline:  (1 of 4) PF09133 - SANTA (SANT Associated) (SANTA) Description:  SANTA (SANT associated) protein
Genomic Order:  1623 Name:  ? Medtr7g039520
Secondary Identifier:  ? PAC:31083175
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g039520 0.5kb upstream 0.5kb upstream 3340 true chr7: 14696793-14700132 Medicago truncatula
Medtr7g039520 0.5kb upstream 0.5kb upstream 500 false chr7: 14699633-14700132 Medicago truncatula
Medtr7g039520 0.5kb downstream 0.5kb downstream 3340 true chr7: 14696293-14699632 Medicago truncatula
Medtr7g039520 0.5kb downstream 0.5kb downstream 500 false chr7: 14696293-14696792 Medicago truncatula
Medtr7g039520 1.0kb upstream 1.0kb upstream 3840 true chr7: 14696793-14700632 Medicago truncatula
Medtr7g039520 1.0kb upstream 1.0kb upstream 1000 false chr7: 14699633-14700632 Medicago truncatula
Medtr7g039520 1.0kb downstream 1.0kb downstream 3840 true chr7: 14695793-14699632 Medicago truncatula
Medtr7g039520 1.0kb downstream 1.0kb downstream 1000 false chr7: 14695793-14696792 Medicago truncatula
Medtr7g039520 2.0kb upstream 2.0kb upstream 4840 true chr7: 14696793-14701632 Medicago truncatula
Medtr7g039520 2.0kb upstream 2.0kb upstream 2000 false chr7: 14699633-14701632 Medicago truncatula
Medtr7g039520 2.0kb downstream 2.0kb downstream 4840 true chr7: 14694793-14699632 Medicago truncatula
Medtr7g039520 2.0kb downstream 2.0kb downstream 2000 false chr7: 14694793-14696792 Medicago truncatula
Medtr7g039520 5.0kb upstream 5.0kb upstream 7840 true chr7: 14696793-14704632 Medicago truncatula
Medtr7g039520 5.0kb upstream 5.0kb upstream 5000 false chr7: 14699633-14704632 Medicago truncatula
Medtr7g039520 5.0kb downstream 5.0kb downstream 7840 true chr7: 14691793-14699632 Medicago truncatula
Medtr7g039520 5.0kb downstream 5.0kb downstream 5000 false chr7: 14691793-14696792 Medicago truncatula
Medtr7g039520 10.0kb upstream 10.0kb upstream 12840 true chr7: 14696793-14709632 Medicago truncatula
Medtr7g039520 10.0kb upstream 10.0kb upstream 10000 false chr7: 14699633-14709632 Medicago truncatula
Medtr7g039520 10.0kb downstream 10.0kb downstream 12840 true chr7: 14686793-14699632 Medicago truncatula
Medtr7g039520 10.0kb downstream 10.0kb downstream 10000 false chr7: 14686793-14696792 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295912 5265 Fabidae View MSA
124072489 5270 Rosid View MSA
123750067 5271 Pentapetalae View MSA
122795958 5272 Eudicot View MSA
122043476 5273 Angiosperm View MSA
121351771 5274 Embryophyte View MSA
123382314 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.373        
cufflinks 5.079        
cufflinks 6.187        
cufflinks 5.706        
cufflinks 5.743        
cufflinks 4.322       Low
cufflinks 6.298        
cufflinks 5.37        
cufflinks 7.027       High

0 Strain