Gene : Medtr7g021770 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR23321//PTHR23321:SF33 - RIBOSOMAL PROTEIN S15, BACTERIAL AND ORGANELLAR Description:  ribulose bisphosphate carboxylase large chain domain protein
Genomic Order:  830 Name:  ? Medtr7g021770
Secondary Identifier:  ? PAC:31079650
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CALVIN-PWY Medicago truncatula pathologic  
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  
Mtruncatula PWY-5723 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g021770 0.5kb upstream 0.5kb upstream 1928 true chr7: 6946405-6948332 Medicago truncatula
Medtr7g021770 0.5kb upstream 0.5kb upstream 500 false chr7: 6947833-6948332 Medicago truncatula
Medtr7g021770 0.5kb downstream 0.5kb downstream 1928 true chr7: 6945905-6947832 Medicago truncatula
Medtr7g021770 0.5kb downstream 0.5kb downstream 500 false chr7: 6945905-6946404 Medicago truncatula
Medtr7g021770 1.0kb upstream 1.0kb upstream 2428 true chr7: 6946405-6948832 Medicago truncatula
Medtr7g021770 1.0kb upstream 1.0kb upstream 1000 false chr7: 6947833-6948832 Medicago truncatula
Medtr7g021770 1.0kb downstream 1.0kb downstream 2428 true chr7: 6945405-6947832 Medicago truncatula
Medtr7g021770 1.0kb downstream 1.0kb downstream 1000 false chr7: 6945405-6946404 Medicago truncatula
Medtr7g021770 2.0kb upstream 2.0kb upstream 3428 true chr7: 6946405-6949832 Medicago truncatula
Medtr7g021770 2.0kb upstream 2.0kb upstream 2000 false chr7: 6947833-6949832 Medicago truncatula
Medtr7g021770 2.0kb downstream 2.0kb downstream 3428 true chr7: 6944405-6947832 Medicago truncatula
Medtr7g021770 2.0kb downstream 2.0kb downstream 2000 false chr7: 6944405-6946404 Medicago truncatula
Medtr7g021770 5.0kb upstream 5.0kb upstream 6428 true chr7: 6946405-6952832 Medicago truncatula
Medtr7g021770 5.0kb upstream 5.0kb upstream 5000 false chr7: 6947833-6952832 Medicago truncatula
Medtr7g021770 5.0kb downstream 5.0kb downstream 6428 true chr7: 6941405-6947832 Medicago truncatula
Medtr7g021770 5.0kb downstream 5.0kb downstream 5000 false chr7: 6941405-6946404 Medicago truncatula
Medtr7g021770 10.0kb upstream 10.0kb upstream 11428 true chr7: 6946405-6957832 Medicago truncatula
Medtr7g021770 10.0kb upstream 10.0kb upstream 10000 false chr7: 6947833-6957832 Medicago truncatula
Medtr7g021770 10.0kb downstream 10.0kb downstream 11428 true chr7: 6936405-6947832 Medicago truncatula
Medtr7g021770 10.0kb downstream 10.0kb downstream 10000 false chr7: 6936405-6946404 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122271671 5265 Fabidae View MSA
124038153 5270 Rosid View MSA
123753610 5271 Pentapetalae View MSA
122775167 5272 Eudicot View MSA
122051023 5273 Angiosperm View MSA
121312251 5274 Embryophyte View MSA
123428195 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.111        
cufflinks 0.116        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.104        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low Low
cufflinks 0.126        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain