Gene : Medtr7g012250 M. truncatula Mt4.0v1
Defline:  (1 of 2) 3.1.3.16//3.1.3.48//3.1.3.67 - Protein-serine/threonine phosphatase / Serine/threonine specific protein phosphatase // Protein-tyrosine-phosphatase / PTPase // Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Description:  calcium/lipid-binding (CaLB) phosphatase
Genomic Order:  424 Name:  ? Medtr7g012250
Secondary Identifier:  ? PAC:31080483
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6368 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g012250 0.5kb upstream 0.5kb upstream 3257 true chr7: 3461572-3464828 Medicago truncatula
Medtr7g012250 0.5kb upstream 0.5kb upstream 500 false chr7: 3464329-3464828 Medicago truncatula
Medtr7g012250 0.5kb downstream 0.5kb downstream 3257 true chr7: 3461072-3464328 Medicago truncatula
Medtr7g012250 0.5kb downstream 0.5kb downstream 500 false chr7: 3461072-3461571 Medicago truncatula
Medtr7g012250 1.0kb upstream 1.0kb upstream 3757 true chr7: 3461572-3465328 Medicago truncatula
Medtr7g012250 1.0kb upstream 1.0kb upstream 1000 false chr7: 3464329-3465328 Medicago truncatula
Medtr7g012250 1.0kb downstream 1.0kb downstream 3757 true chr7: 3460572-3464328 Medicago truncatula
Medtr7g012250 1.0kb downstream 1.0kb downstream 1000 false chr7: 3460572-3461571 Medicago truncatula
Medtr7g012250 2.0kb upstream 2.0kb upstream 4757 true chr7: 3461572-3466328 Medicago truncatula
Medtr7g012250 2.0kb upstream 2.0kb upstream 2000 false chr7: 3464329-3466328 Medicago truncatula
Medtr7g012250 2.0kb downstream 2.0kb downstream 4757 true chr7: 3459572-3464328 Medicago truncatula
Medtr7g012250 2.0kb downstream 2.0kb downstream 2000 false chr7: 3459572-3461571 Medicago truncatula
Medtr7g012250 5.0kb upstream 5.0kb upstream 7757 true chr7: 3461572-3469328 Medicago truncatula
Medtr7g012250 5.0kb upstream 5.0kb upstream 5000 false chr7: 3464329-3469328 Medicago truncatula
Medtr7g012250 5.0kb downstream 5.0kb downstream 7757 true chr7: 3456572-3464328 Medicago truncatula
Medtr7g012250 5.0kb downstream 5.0kb downstream 5000 false chr7: 3456572-3461571 Medicago truncatula
Medtr7g012250 10.0kb upstream 10.0kb upstream 12757 true chr7: 3461572-3474328 Medicago truncatula
Medtr7g012250 10.0kb upstream 10.0kb upstream 10000 false chr7: 3464329-3474328 Medicago truncatula
Medtr7g012250 10.0kb downstream 10.0kb downstream 12757 true chr7: 3451572-3464328 Medicago truncatula
Medtr7g012250 10.0kb downstream 10.0kb downstream 10000 false chr7: 3451572-3461571 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308966 5265 Fabidae View MSA
124050149 5270 Rosid View MSA
123737073 5271 Pentapetalae View MSA
122787177 5272 Eudicot View MSA
122048056 5273 Angiosperm View MSA
121345998 5274 Embryophyte View MSA
123380306 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.068     Low  
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.116       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.038     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain