Gene : Medtr7g013300 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR10357//PTHR10357:SF157 - ALPHA-AMYLASE Description:  alpha amylase domain protein
Genomic Order:  476 Name:  ? Medtr7g013300
Secondary Identifier:  ? PAC:31081212
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g013300 0.5kb upstream 0.5kb upstream 15111 true chr7: 3823076-3838186 Medicago truncatula
Medtr7g013300 0.5kb upstream 0.5kb upstream 500 false chr7: 3837687-3838186 Medicago truncatula
Medtr7g013300 0.5kb downstream 0.5kb downstream 15111 true chr7: 3822576-3837686 Medicago truncatula
Medtr7g013300 0.5kb downstream 0.5kb downstream 500 false chr7: 3822576-3823075 Medicago truncatula
Medtr7g013300 1.0kb upstream 1.0kb upstream 15611 true chr7: 3823076-3838686 Medicago truncatula
Medtr7g013300 1.0kb upstream 1.0kb upstream 1000 false chr7: 3837687-3838686 Medicago truncatula
Medtr7g013300 1.0kb downstream 1.0kb downstream 15611 true chr7: 3822076-3837686 Medicago truncatula
Medtr7g013300 1.0kb downstream 1.0kb downstream 1000 false chr7: 3822076-3823075 Medicago truncatula
Medtr7g013300 2.0kb upstream 2.0kb upstream 16611 true chr7: 3823076-3839686 Medicago truncatula
Medtr7g013300 2.0kb upstream 2.0kb upstream 2000 false chr7: 3837687-3839686 Medicago truncatula
Medtr7g013300 2.0kb downstream 2.0kb downstream 16611 true chr7: 3821076-3837686 Medicago truncatula
Medtr7g013300 2.0kb downstream 2.0kb downstream 2000 false chr7: 3821076-3823075 Medicago truncatula
Medtr7g013300 5.0kb upstream 5.0kb upstream 19611 true chr7: 3823076-3842686 Medicago truncatula
Medtr7g013300 5.0kb upstream 5.0kb upstream 5000 false chr7: 3837687-3842686 Medicago truncatula
Medtr7g013300 5.0kb downstream 5.0kb downstream 19611 true chr7: 3818076-3837686 Medicago truncatula
Medtr7g013300 5.0kb downstream 5.0kb downstream 5000 false chr7: 3818076-3823075 Medicago truncatula
Medtr7g013300 10.0kb upstream 10.0kb upstream 24611 true chr7: 3823076-3847686 Medicago truncatula
Medtr7g013300 10.0kb upstream 10.0kb upstream 10000 false chr7: 3837687-3847686 Medicago truncatula
Medtr7g013300 10.0kb downstream 10.0kb downstream 24611 true chr7: 3813076-3837686 Medicago truncatula
Medtr7g013300 10.0kb downstream 10.0kb downstream 10000 false chr7: 3813076-3823075 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301333 5265 Fabidae View MSA
124070073 5270 Rosid View MSA
123751733 5271 Pentapetalae View MSA
122785800 5272 Eudicot View MSA
122050125 5273 Angiosperm View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.056        
cufflinks 1.943        
cufflinks 1.387        
cufflinks 0.099       Low
cufflinks 2.05        
cufflinks 0.091     Low Low
cufflinks 0.347        
cufflinks 1.604        
cufflinks 0.25        

0 Strain