Gene : Medtr7g094500 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR13829 - SNRNP CORE PROTEIN FAMILY MEMBER Description:  u6 snRNA-associated-like-Smprotein
Genomic Order:  4589 Name:  ? Medtr7g094500
Secondary Identifier:  ? PAC:31077161
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g094500 0.5kb upstream 0.5kb upstream 5836 true chr7: 37613634-37619469 Medicago truncatula
Medtr7g094500 0.5kb upstream 0.5kb upstream 500 false chr7: 37613634-37614133 Medicago truncatula
Medtr7g094500 0.5kb downstream 0.5kb downstream 5836 true chr7: 37614134-37619969 Medicago truncatula
Medtr7g094500 0.5kb downstream 0.5kb downstream 500 false chr7: 37619470-37619969 Medicago truncatula
Medtr7g094500 1.0kb upstream 1.0kb upstream 6336 true chr7: 37613134-37619469 Medicago truncatula
Medtr7g094500 1.0kb upstream 1.0kb upstream 1000 false chr7: 37613134-37614133 Medicago truncatula
Medtr7g094500 1.0kb downstream 1.0kb downstream 6336 true chr7: 37614134-37620469 Medicago truncatula
Medtr7g094500 1.0kb downstream 1.0kb downstream 1000 false chr7: 37619470-37620469 Medicago truncatula
Medtr7g094500 2.0kb upstream 2.0kb upstream 7336 true chr7: 37612134-37619469 Medicago truncatula
Medtr7g094500 2.0kb upstream 2.0kb upstream 2000 false chr7: 37612134-37614133 Medicago truncatula
Medtr7g094500 2.0kb downstream 2.0kb downstream 7336 true chr7: 37614134-37621469 Medicago truncatula
Medtr7g094500 2.0kb downstream 2.0kb downstream 2000 false chr7: 37619470-37621469 Medicago truncatula
Medtr7g094500 5.0kb upstream 5.0kb upstream 10336 true chr7: 37609134-37619469 Medicago truncatula
Medtr7g094500 5.0kb upstream 5.0kb upstream 5000 false chr7: 37609134-37614133 Medicago truncatula
Medtr7g094500 5.0kb downstream 5.0kb downstream 10336 true chr7: 37614134-37624469 Medicago truncatula
Medtr7g094500 5.0kb downstream 5.0kb downstream 5000 false chr7: 37619470-37624469 Medicago truncatula
Medtr7g094500 10.0kb upstream 10.0kb upstream 15336 true chr7: 37604134-37619469 Medicago truncatula
Medtr7g094500 10.0kb upstream 10.0kb upstream 10000 false chr7: 37604134-37614133 Medicago truncatula
Medtr7g094500 10.0kb downstream 10.0kb downstream 15336 true chr7: 37614134-37629469 Medicago truncatula
Medtr7g094500 10.0kb downstream 10.0kb downstream 10000 false chr7: 37619470-37629469 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299509 5265 Fabidae View MSA
124061118 5270 Rosid View MSA
123743245 5271 Pentapetalae View MSA
122795918 5272 Eudicot View MSA
122043046 5273 Angiosperm View MSA
121347447 5274 Embryophyte View MSA
123425045 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.487        
cufflinks 5.578        
cufflinks 7.163       High
cufflinks 4.821       Low
cufflinks 6.781       High
cufflinks 5.368        
cufflinks 4.546       Low
cufflinks 6.257        
cufflinks 5.476        

0 Strain