Gene : Medtr7g094490 M. truncatula Mt4.0v1
Defline:  (1 of 8) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Description:  BTB/POZ/MATH-domain protein
Genomic Order:  4588 Name:  ? Medtr7g094490
Secondary Identifier:  ? PAC:31082009
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g094490 0.5kb upstream 0.5kb upstream 4196 true chr7: 37608530-37612725 Medicago truncatula
Medtr7g094490 0.5kb upstream 0.5kb upstream 500 false chr7: 37608530-37609029 Medicago truncatula
Medtr7g094490 0.5kb downstream 0.5kb downstream 4196 true chr7: 37609030-37613225 Medicago truncatula
Medtr7g094490 0.5kb downstream 0.5kb downstream 500 false chr7: 37612726-37613225 Medicago truncatula
Medtr7g094490 1.0kb upstream 1.0kb upstream 4696 true chr7: 37608030-37612725 Medicago truncatula
Medtr7g094490 1.0kb upstream 1.0kb upstream 1000 false chr7: 37608030-37609029 Medicago truncatula
Medtr7g094490 1.0kb downstream 1.0kb downstream 4696 true chr7: 37609030-37613725 Medicago truncatula
Medtr7g094490 1.0kb downstream 1.0kb downstream 1000 false chr7: 37612726-37613725 Medicago truncatula
Medtr7g094490 2.0kb upstream 2.0kb upstream 5696 true chr7: 37607030-37612725 Medicago truncatula
Medtr7g094490 2.0kb upstream 2.0kb upstream 2000 false chr7: 37607030-37609029 Medicago truncatula
Medtr7g094490 2.0kb downstream 2.0kb downstream 5696 true chr7: 37609030-37614725 Medicago truncatula
Medtr7g094490 2.0kb downstream 2.0kb downstream 2000 false chr7: 37612726-37614725 Medicago truncatula
Medtr7g094490 5.0kb upstream 5.0kb upstream 8696 true chr7: 37604030-37612725 Medicago truncatula
Medtr7g094490 5.0kb upstream 5.0kb upstream 5000 false chr7: 37604030-37609029 Medicago truncatula
Medtr7g094490 5.0kb downstream 5.0kb downstream 8696 true chr7: 37609030-37617725 Medicago truncatula
Medtr7g094490 5.0kb downstream 5.0kb downstream 5000 false chr7: 37612726-37617725 Medicago truncatula
Medtr7g094490 10.0kb upstream 10.0kb upstream 13696 true chr7: 37599030-37612725 Medicago truncatula
Medtr7g094490 10.0kb upstream 10.0kb upstream 10000 false chr7: 37599030-37609029 Medicago truncatula
Medtr7g094490 10.0kb downstream 10.0kb downstream 13696 true chr7: 37609030-37622725 Medicago truncatula
Medtr7g094490 10.0kb downstream 10.0kb downstream 10000 false chr7: 37612726-37622725 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040960 5273 Angiosperm View MSA
122309857 5265 Fabidae View MSA
124064148 5270 Rosid View MSA
123743633 5271 Pentapetalae View MSA
122791318 5272 Eudicot View MSA
121348457 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.751     High  
cufflinks 18.845     High  
cufflinks 20.221     High  
cufflinks 51.991     High High
cufflinks 18.733     High  
cufflinks 22.86     High  
cufflinks 28.492     High  
cufflinks 17.392     High  
cufflinks 41.35     High High

0 Strain