Gene : Medtr7g096480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PF07724//PF10431 - AAA domain (Cdc48 subfamily) (AAA_2) // C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) Description:  101 kDa heat shock protein
Genomic Order:  4720 Name:  ? Medtr7g096480
Secondary Identifier:  ? PAC:31078999
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g096480 0.5kb upstream 0.5kb upstream 2154 true chr7: 38707101-38709254 Medicago truncatula
Medtr7g096480 0.5kb upstream 0.5kb upstream 500 false chr7: 38707101-38707600 Medicago truncatula
Medtr7g096480 0.5kb downstream 0.5kb downstream 2154 true chr7: 38707601-38709754 Medicago truncatula
Medtr7g096480 0.5kb downstream 0.5kb downstream 500 false chr7: 38709255-38709754 Medicago truncatula
Medtr7g096480 1.0kb upstream 1.0kb upstream 2654 true chr7: 38706601-38709254 Medicago truncatula
Medtr7g096480 1.0kb upstream 1.0kb upstream 1000 false chr7: 38706601-38707600 Medicago truncatula
Medtr7g096480 1.0kb downstream 1.0kb downstream 2654 true chr7: 38707601-38710254 Medicago truncatula
Medtr7g096480 1.0kb downstream 1.0kb downstream 1000 false chr7: 38709255-38710254 Medicago truncatula
Medtr7g096480 2.0kb upstream 2.0kb upstream 3654 true chr7: 38705601-38709254 Medicago truncatula
Medtr7g096480 2.0kb upstream 2.0kb upstream 2000 false chr7: 38705601-38707600 Medicago truncatula
Medtr7g096480 2.0kb downstream 2.0kb downstream 3654 true chr7: 38707601-38711254 Medicago truncatula
Medtr7g096480 2.0kb downstream 2.0kb downstream 2000 false chr7: 38709255-38711254 Medicago truncatula
Medtr7g096480 5.0kb upstream 5.0kb upstream 6654 true chr7: 38702601-38709254 Medicago truncatula
Medtr7g096480 5.0kb upstream 5.0kb upstream 5000 false chr7: 38702601-38707600 Medicago truncatula
Medtr7g096480 5.0kb downstream 5.0kb downstream 6654 true chr7: 38707601-38714254 Medicago truncatula
Medtr7g096480 5.0kb downstream 5.0kb downstream 5000 false chr7: 38709255-38714254 Medicago truncatula
Medtr7g096480 10.0kb upstream 10.0kb upstream 11654 true chr7: 38697601-38709254 Medicago truncatula
Medtr7g096480 10.0kb upstream 10.0kb upstream 10000 false chr7: 38697601-38707600 Medicago truncatula
Medtr7g096480 10.0kb downstream 10.0kb downstream 11654 true chr7: 38707601-38719254 Medicago truncatula
Medtr7g096480 10.0kb downstream 10.0kb downstream 10000 false chr7: 38709255-38719254 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121628628 5273 Angiosperm Singleton cluster - no MSA
122266891 5265 Fabidae Singleton cluster - no MSA
124007870 5270 Rosid Singleton cluster - no MSA
123581877 5271 Pentapetalae Singleton cluster - no MSA
122616581 5272 Eudicot Singleton cluster - no MSA
120900732 5274 Embryophyte Singleton cluster - no MSA
122941387 5275 Viridiplantae Singleton cluster - no MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain