Gene : Medtr7g005970 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR13711:SF202 - HIGH MOBILITY GROUP B PROTEIN 10-RELATED Description:  high mobility group B-like protein
Genomic Order:  56 Name:  ? Medtr7g005970
Secondary Identifier:  ? PAC:31082368
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g005970 0.5kb upstream 0.5kb upstream 4288 true chr7: 434978-439265 Medicago truncatula
Medtr7g005970 0.5kb upstream 0.5kb upstream 500 false chr7: 434978-435477 Medicago truncatula
Medtr7g005970 0.5kb downstream 0.5kb downstream 4288 true chr7: 435478-439765 Medicago truncatula
Medtr7g005970 0.5kb downstream 0.5kb downstream 500 false chr7: 439266-439765 Medicago truncatula
Medtr7g005970 1.0kb upstream 1.0kb upstream 4788 true chr7: 434478-439265 Medicago truncatula
Medtr7g005970 1.0kb upstream 1.0kb upstream 1000 false chr7: 434478-435477 Medicago truncatula
Medtr7g005970 1.0kb downstream 1.0kb downstream 4788 true chr7: 435478-440265 Medicago truncatula
Medtr7g005970 1.0kb downstream 1.0kb downstream 1000 false chr7: 439266-440265 Medicago truncatula
Medtr7g005970 2.0kb upstream 2.0kb upstream 5788 true chr7: 433478-439265 Medicago truncatula
Medtr7g005970 2.0kb upstream 2.0kb upstream 2000 false chr7: 433478-435477 Medicago truncatula
Medtr7g005970 2.0kb downstream 2.0kb downstream 5788 true chr7: 435478-441265 Medicago truncatula
Medtr7g005970 2.0kb downstream 2.0kb downstream 2000 false chr7: 439266-441265 Medicago truncatula
Medtr7g005970 5.0kb upstream 5.0kb upstream 8788 true chr7: 430478-439265 Medicago truncatula
Medtr7g005970 5.0kb upstream 5.0kb upstream 5000 false chr7: 430478-435477 Medicago truncatula
Medtr7g005970 5.0kb downstream 5.0kb downstream 8788 true chr7: 435478-444265 Medicago truncatula
Medtr7g005970 5.0kb downstream 5.0kb downstream 5000 false chr7: 439266-444265 Medicago truncatula
Medtr7g005970 10.0kb upstream 10.0kb upstream 13788 true chr7: 425478-439265 Medicago truncatula
Medtr7g005970 10.0kb upstream 10.0kb upstream 10000 false chr7: 425478-435477 Medicago truncatula
Medtr7g005970 10.0kb downstream 10.0kb downstream 13788 true chr7: 435478-449265 Medicago truncatula
Medtr7g005970 10.0kb downstream 10.0kb downstream 10000 false chr7: 439266-449265 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122288635 5265 Fabidae View MSA
124071278 5270 Rosid View MSA
123745117 5271 Pentapetalae View MSA
122793766 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low High
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain