Gene : Medtr7g099330 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR23023:SF83 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA5-RELATED Description:  indole-3-pyruvate monooxygenase
Genomic Order:  4893 Name:  ? Medtr7g099330
Secondary Identifier:  ? PAC:31077418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWYDQC-4 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g099330 0.5kb upstream 0.5kb upstream 2682 true chr7: 39838250-39840931 Medicago truncatula
Medtr7g099330 0.5kb upstream 0.5kb upstream 500 false chr7: 39838250-39838749 Medicago truncatula
Medtr7g099330 0.5kb downstream 0.5kb downstream 2682 true chr7: 39838750-39841431 Medicago truncatula
Medtr7g099330 0.5kb downstream 0.5kb downstream 500 false chr7: 39840932-39841431 Medicago truncatula
Medtr7g099330 1.0kb upstream 1.0kb upstream 3182 true chr7: 39837750-39840931 Medicago truncatula
Medtr7g099330 1.0kb upstream 1.0kb upstream 1000 false chr7: 39837750-39838749 Medicago truncatula
Medtr7g099330 1.0kb downstream 1.0kb downstream 3182 true chr7: 39838750-39841931 Medicago truncatula
Medtr7g099330 1.0kb downstream 1.0kb downstream 1000 false chr7: 39840932-39841931 Medicago truncatula
Medtr7g099330 2.0kb upstream 2.0kb upstream 4182 true chr7: 39836750-39840931 Medicago truncatula
Medtr7g099330 2.0kb upstream 2.0kb upstream 2000 false chr7: 39836750-39838749 Medicago truncatula
Medtr7g099330 2.0kb downstream 2.0kb downstream 4182 true chr7: 39838750-39842931 Medicago truncatula
Medtr7g099330 2.0kb downstream 2.0kb downstream 2000 false chr7: 39840932-39842931 Medicago truncatula
Medtr7g099330 5.0kb upstream 5.0kb upstream 7182 true chr7: 39833750-39840931 Medicago truncatula
Medtr7g099330 5.0kb upstream 5.0kb upstream 5000 false chr7: 39833750-39838749 Medicago truncatula
Medtr7g099330 5.0kb downstream 5.0kb downstream 7182 true chr7: 39838750-39845931 Medicago truncatula
Medtr7g099330 5.0kb downstream 5.0kb downstream 5000 false chr7: 39840932-39845931 Medicago truncatula
Medtr7g099330 10.0kb upstream 10.0kb upstream 12182 true chr7: 39828750-39840931 Medicago truncatula
Medtr7g099330 10.0kb upstream 10.0kb upstream 10000 false chr7: 39828750-39838749 Medicago truncatula
Medtr7g099330 10.0kb downstream 10.0kb downstream 12182 true chr7: 39838750-39850931 Medicago truncatula
Medtr7g099330 10.0kb downstream 10.0kb downstream 10000 false chr7: 39840932-39850931 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300013 5265 Fabidae View MSA
124062448 5270 Rosid View MSA
123751619 5271 Pentapetalae View MSA
122797534 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.41       High
cufflinks 0.567        
cufflinks 0.333        
cufflinks 0.812        
cufflinks 0.165       Low
cufflinks 0.56        
cufflinks 7.193       High
cufflinks 0.37        
cufflinks 7.101       High

0 Strain