Gene : Medtr7g062250 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR11709:SF66 - LACCASE-17 Description:  laccase/diphenol oxidase family protein
Genomic Order:  2465 Name:  ? Medtr7g062250
Secondary Identifier:  ? PAC:31079125
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5466 Medicago truncatula pathologic  
Mtruncatula PWY-6824 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g062250 0.5kb upstream 0.5kb upstream 4352 true chr7: 22600556-22604907 Medicago truncatula
Medtr7g062250 0.5kb upstream 0.5kb upstream 500 false chr7: 22600556-22601055 Medicago truncatula
Medtr7g062250 0.5kb downstream 0.5kb downstream 4352 true chr7: 22601056-22605407 Medicago truncatula
Medtr7g062250 0.5kb downstream 0.5kb downstream 500 false chr7: 22604908-22605407 Medicago truncatula
Medtr7g062250 1.0kb upstream 1.0kb upstream 4852 true chr7: 22600056-22604907 Medicago truncatula
Medtr7g062250 1.0kb upstream 1.0kb upstream 1000 false chr7: 22600056-22601055 Medicago truncatula
Medtr7g062250 1.0kb downstream 1.0kb downstream 4852 true chr7: 22601056-22605907 Medicago truncatula
Medtr7g062250 1.0kb downstream 1.0kb downstream 1000 false chr7: 22604908-22605907 Medicago truncatula
Medtr7g062250 2.0kb upstream 2.0kb upstream 5852 true chr7: 22599056-22604907 Medicago truncatula
Medtr7g062250 2.0kb upstream 2.0kb upstream 2000 false chr7: 22599056-22601055 Medicago truncatula
Medtr7g062250 2.0kb downstream 2.0kb downstream 5852 true chr7: 22601056-22606907 Medicago truncatula
Medtr7g062250 2.0kb downstream 2.0kb downstream 2000 false chr7: 22604908-22606907 Medicago truncatula
Medtr7g062250 5.0kb upstream 5.0kb upstream 8852 true chr7: 22596056-22604907 Medicago truncatula
Medtr7g062250 5.0kb upstream 5.0kb upstream 5000 false chr7: 22596056-22601055 Medicago truncatula
Medtr7g062250 5.0kb downstream 5.0kb downstream 8852 true chr7: 22601056-22609907 Medicago truncatula
Medtr7g062250 5.0kb downstream 5.0kb downstream 5000 false chr7: 22604908-22609907 Medicago truncatula
Medtr7g062250 10.0kb upstream 10.0kb upstream 13852 true chr7: 22591056-22604907 Medicago truncatula
Medtr7g062250 10.0kb upstream 10.0kb upstream 10000 false chr7: 22591056-22601055 Medicago truncatula
Medtr7g062250 10.0kb downstream 10.0kb downstream 13852 true chr7: 22601056-22614907 Medicago truncatula
Medtr7g062250 10.0kb downstream 10.0kb downstream 10000 false chr7: 22604908-22614907 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310343 5265 Fabidae View MSA
124069683 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.059     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.306       High

0 Strain