Gene : Medtr7g062540 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR31384:SF1 - AUXIN RESPONSE FACTOR 12-RELATED Description:  auxin response factor 2
Genomic Order:  2482 Name:  ? Medtr7g062540
Secondary Identifier:  ? PAC:31078830
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g062540 0.5kb upstream 0.5kb upstream 5920 true chr7: 22755778-22761697 Medicago truncatula
Medtr7g062540 0.5kb upstream 0.5kb upstream 500 false chr7: 22755778-22756277 Medicago truncatula
Medtr7g062540 0.5kb downstream 0.5kb downstream 5920 true chr7: 22756278-22762197 Medicago truncatula
Medtr7g062540 0.5kb downstream 0.5kb downstream 500 false chr7: 22761698-22762197 Medicago truncatula
Medtr7g062540 1.0kb upstream 1.0kb upstream 6420 true chr7: 22755278-22761697 Medicago truncatula
Medtr7g062540 1.0kb upstream 1.0kb upstream 1000 false chr7: 22755278-22756277 Medicago truncatula
Medtr7g062540 1.0kb downstream 1.0kb downstream 6420 true chr7: 22756278-22762697 Medicago truncatula
Medtr7g062540 1.0kb downstream 1.0kb downstream 1000 false chr7: 22761698-22762697 Medicago truncatula
Medtr7g062540 2.0kb upstream 2.0kb upstream 7420 true chr7: 22754278-22761697 Medicago truncatula
Medtr7g062540 2.0kb upstream 2.0kb upstream 2000 false chr7: 22754278-22756277 Medicago truncatula
Medtr7g062540 2.0kb downstream 2.0kb downstream 7420 true chr7: 22756278-22763697 Medicago truncatula
Medtr7g062540 2.0kb downstream 2.0kb downstream 2000 false chr7: 22761698-22763697 Medicago truncatula
Medtr7g062540 5.0kb upstream 5.0kb upstream 10420 true chr7: 22751278-22761697 Medicago truncatula
Medtr7g062540 5.0kb upstream 5.0kb upstream 5000 false chr7: 22751278-22756277 Medicago truncatula
Medtr7g062540 5.0kb downstream 5.0kb downstream 10420 true chr7: 22756278-22766697 Medicago truncatula
Medtr7g062540 5.0kb downstream 5.0kb downstream 5000 false chr7: 22761698-22766697 Medicago truncatula
Medtr7g062540 10.0kb upstream 10.0kb upstream 15420 true chr7: 22746278-22761697 Medicago truncatula
Medtr7g062540 10.0kb upstream 10.0kb upstream 10000 false chr7: 22746278-22756277 Medicago truncatula
Medtr7g062540 10.0kb downstream 10.0kb downstream 15420 true chr7: 22756278-22771697 Medicago truncatula
Medtr7g062540 10.0kb downstream 10.0kb downstream 10000 false chr7: 22761698-22771697 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314048 5265 Fabidae View MSA
124070371 5270 Rosid View MSA
123743990 5271 Pentapetalae View MSA
122792006 5272 Eudicot View MSA
122050868 5273 Angiosperm View MSA
121348224 5274 Embryophyte View MSA
123380779 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.058        
cufflinks 0.407        
cufflinks 0.438        
cufflinks 1.681        
cufflinks 0.454        
cufflinks 1.7        
cufflinks 7.087       High
cufflinks 0.441        
cufflinks 18.881     High High

0 Strain