Gene : Medtr7g063860 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR15316 - SPLICEOSOME ASSOCIATED PROTEIN 114/SWAP SPLICING FACTOR-RELATED Description:  splicing factor 3A, protein
Genomic Order:  2564 Name:  ? Medtr7g063860
Secondary Identifier:  ? PAC:31079328
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g063860 0.5kb upstream 0.5kb upstream 1841 true chr7: 23335686-23337526 Medicago truncatula
Medtr7g063860 0.5kb upstream 0.5kb upstream 500 false chr7: 23335686-23336185 Medicago truncatula
Medtr7g063860 0.5kb downstream 0.5kb downstream 1841 true chr7: 23336186-23338026 Medicago truncatula
Medtr7g063860 0.5kb downstream 0.5kb downstream 500 false chr7: 23337527-23338026 Medicago truncatula
Medtr7g063860 1.0kb upstream 1.0kb upstream 2341 true chr7: 23335186-23337526 Medicago truncatula
Medtr7g063860 1.0kb upstream 1.0kb upstream 1000 false chr7: 23335186-23336185 Medicago truncatula
Medtr7g063860 1.0kb downstream 1.0kb downstream 2341 true chr7: 23336186-23338526 Medicago truncatula
Medtr7g063860 1.0kb downstream 1.0kb downstream 1000 false chr7: 23337527-23338526 Medicago truncatula
Medtr7g063860 2.0kb upstream 2.0kb upstream 3341 true chr7: 23334186-23337526 Medicago truncatula
Medtr7g063860 2.0kb upstream 2.0kb upstream 2000 false chr7: 23334186-23336185 Medicago truncatula
Medtr7g063860 2.0kb downstream 2.0kb downstream 3341 true chr7: 23336186-23339526 Medicago truncatula
Medtr7g063860 2.0kb downstream 2.0kb downstream 2000 false chr7: 23337527-23339526 Medicago truncatula
Medtr7g063860 5.0kb upstream 5.0kb upstream 6341 true chr7: 23331186-23337526 Medicago truncatula
Medtr7g063860 5.0kb upstream 5.0kb upstream 5000 false chr7: 23331186-23336185 Medicago truncatula
Medtr7g063860 5.0kb downstream 5.0kb downstream 6341 true chr7: 23336186-23342526 Medicago truncatula
Medtr7g063860 5.0kb downstream 5.0kb downstream 5000 false chr7: 23337527-23342526 Medicago truncatula
Medtr7g063860 10.0kb upstream 10.0kb upstream 11341 true chr7: 23326186-23337526 Medicago truncatula
Medtr7g063860 10.0kb upstream 10.0kb upstream 10000 false chr7: 23326186-23336185 Medicago truncatula
Medtr7g063860 10.0kb downstream 10.0kb downstream 11341 true chr7: 23336186-23347526 Medicago truncatula
Medtr7g063860 10.0kb downstream 10.0kb downstream 10000 false chr7: 23337527-23347526 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779865 5273 Angiosperm View MSA
122266971 5265 Fabidae Singleton cluster - no MSA
124038686 5270 Rosid View MSA
123744372 5271 Pentapetalae View MSA
122771050 5272 Eudicot View MSA
121051501 5274 Embryophyte View MSA
123428531 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed

0 Strain