Gene : Medtr7g045505 M. truncatula Mt4.0v1
Defline:  (1 of 14) PF00176//PF00271 - SNF2 family N-terminal domain (SNF2_N) // Helicase conserved C-terminal domain (Helicase_C) Description:  Nodule-specific Glycine Rich Peptide
Genomic Order:  1726 Name:  ? Medtr7g045505
Secondary Identifier:  ? PAC:31077094
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr7g045505 0.5kb upstream 0.5kb upstream 7926 true chr7: 16013708-16021633 Medicago truncatula
Medtr7g045505 0.5kb upstream 0.5kb upstream 500 false chr7: 16013708-16014207 Medicago truncatula
Medtr7g045505 0.5kb downstream 0.5kb downstream 7926 true chr7: 16014208-16022133 Medicago truncatula
Medtr7g045505 0.5kb downstream 0.5kb downstream 500 false chr7: 16021634-16022133 Medicago truncatula
Medtr7g045505 1.0kb upstream 1.0kb upstream 8426 true chr7: 16013208-16021633 Medicago truncatula
Medtr7g045505 1.0kb upstream 1.0kb upstream 1000 false chr7: 16013208-16014207 Medicago truncatula
Medtr7g045505 1.0kb downstream 1.0kb downstream 8426 true chr7: 16014208-16022633 Medicago truncatula
Medtr7g045505 1.0kb downstream 1.0kb downstream 1000 false chr7: 16021634-16022633 Medicago truncatula
Medtr7g045505 2.0kb upstream 2.0kb upstream 9426 true chr7: 16012208-16021633 Medicago truncatula
Medtr7g045505 2.0kb upstream 2.0kb upstream 2000 false chr7: 16012208-16014207 Medicago truncatula
Medtr7g045505 2.0kb downstream 2.0kb downstream 9426 true chr7: 16014208-16023633 Medicago truncatula
Medtr7g045505 2.0kb downstream 2.0kb downstream 2000 false chr7: 16021634-16023633 Medicago truncatula
Medtr7g045505 5.0kb upstream 5.0kb upstream 12426 true chr7: 16009208-16021633 Medicago truncatula
Medtr7g045505 5.0kb upstream 5.0kb upstream 5000 false chr7: 16009208-16014207 Medicago truncatula
Medtr7g045505 5.0kb downstream 5.0kb downstream 12426 true chr7: 16014208-16026633 Medicago truncatula
Medtr7g045505 5.0kb downstream 5.0kb downstream 5000 false chr7: 16021634-16026633 Medicago truncatula
Medtr7g045505 10.0kb upstream 10.0kb upstream 17426 true chr7: 16004208-16021633 Medicago truncatula
Medtr7g045505 10.0kb upstream 10.0kb upstream 10000 false chr7: 16004208-16014207 Medicago truncatula
Medtr7g045505 10.0kb downstream 10.0kb downstream 17426 true chr7: 16014208-16031633 Medicago truncatula
Medtr7g045505 10.0kb downstream 10.0kb downstream 10000 false chr7: 16021634-16031633 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026277 5273 Angiosperm View MSA
122309224 5265 Fabidae View MSA
124063375 5270 Rosid View MSA
123740269 5271 Pentapetalae View MSA
122792604 5272 Eudicot View MSA
121347907 5274 Embryophyte View MSA
123380672 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.051     Low  
cufflinks 0.055     Low  
cufflinks 0.063     Low  
cufflinks 0.024     Low Low
cufflinks 0.066        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.051     Low  
cufflinks 0.075     Low High

0 Strain